RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 DCLRE1CQ96SD1 692 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 DHRS4Q9BTZ2 278 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 DUSP26Q9BV47 211 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 SLC46A2Q9BY10 475 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 TEX101Q9BY14 249 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 CPEB1Q9BZB8 566 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 C14orf93Q9H972 538 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 POLR3BQ9NW08 1133 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 SYBUQ9NX95 663 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 KCMF1Q9P0J7 381 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 POGKQ9P215 609 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 PPP1R1BQ9UD71 204 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 NDOR1Q9UHB4 597 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 MAP3K2Q9Y2U5 619 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 TNPO3Q9Y5L0 923 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 SETD1BQ9UPS6 1966 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 COL3A1P02461 1466 aaPredicted RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 SALL3Q9BXA9 1300 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 LOC101059915A0A1B0GWI6 518 aaPredicted RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 UBA6A0AVT1 1052 aaPredicted RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 GAGE12BA1L429 117 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 WDR91A4D1P6 747 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 GAGE12HA6NDE8 117 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 LRRC3CA6NJW4 275 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 NRP1O14786 923 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 MAFGO15525 162 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 PDPK1O15530 556 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ADCY3O60266 1144 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ALDH1A2O94788 518 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 FSBPO95073 299 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 SPDEFO95238 335 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ESRRBO95718 433 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 FGRP09769 529 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 FAM153BP0C7A2 387 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 CLEC2LP0C7M8 214 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 EGR2P11161 476 aaPredicted RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 TYRP1P17643 537 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 KCNA6P17658 529 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 PTX3P26022 381 aaPredicted RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 DDX6P26196 483 aaKnown RBP eCLIP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 BMPR1AP36894 532 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 GZMKP49863 264 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 BCAR1P56945 870 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 CD69Q07108 199 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ADCY2Q08462 1091 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 SSRP1Q08945 709 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 MPP3Q13368 585 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 MRPL49Q13405 166 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 RAB33AQ14088 237 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 DDB1Q16531 1140 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 MAN2A1Q16706 1144 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ARHGAP44Q17R89 818 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 BEAN1Q3B7T3 259 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 PDCD4Q53EL6 469 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 TMEM177Q53S58 311 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 AKNAD1Q5T1N1 836 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 LCE1AQ5T7P2 110 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ABHD17BQ5VST6 288 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 TIGD7Q6NT04 549 aaPredicted RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ABHD17CQ6PCB6 329 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 UNQ6494/PRO21346Q6UXR6 183 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 BMP8AQ7Z5Y6 402 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 GRASPQ7Z6J2 395 aaPredicted RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 MCF2L2Q86YR7 1114 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 SRRM1Q8IYB3 904 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 C9orf106Q8NAJ2 232 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 OR52N2Q8NGI0 321 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ASB10Q8WXI3 467 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 LINC00476Q8WZB0 136 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 RPGRQ92834 1020 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 FERMT2Q96AC1 680 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 IL17RAQ96F46 866 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 EXOC2Q96KP1 924 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 PHACTR3Q96KR7 559 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 Q96MF0 132 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF778Q96MU6 729 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 PDCD2LQ9BRP1 358 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 NOL10Q9BSC4 688 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 SOX7Q9BT81 388 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 BOCQ9BWV1 1114 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 LSM14BQ9BX40 385 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 BRIP1Q9BX63 1249 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ALOXE3Q9BYJ1 711 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 KRTAP4-3Q9BYR4 195 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 TRIM55Q9BYV6 548 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 CELF4Q9BZC1 486 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 MTFR1LQ9H019 292 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 MTG2Q9H4K7 406 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 PCIF1Q9H4Z3 704 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 SLC52A2Q9HAB3 445 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 ACSS2Q9NR19 701 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 IL17RBQ9NRM6 502 aa0.92□□□□□ -2.26
SNORD28-201ENST00000384706 INTS7Q9NVH2 962 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 KIAA1522Q9P206 1035 aaPredicted RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 MRPS23Q9Y3D9 190 aaKnown RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 USP15Q9Y4E8 981 aaPredicted RBP0.92□□□□□ -2.26
SNORD28-201ENST00000384706 KDM2BQ8NHM5 1336 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 A0A0A6YYJ9 748 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 TCRBV16S1A1N1A0A5B0 115 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms