RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 MMP13P45452 471 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 ELF3P78545 371 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 RBM26Q5T8P6 1007 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 CIAPIN1Q6FI81 312 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 ZDHHC14Q8IZN3 488 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 OGFOD1Q8N543 542 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 ERMNQ8TAM6 284 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 KRT35Q92764 455 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 LENG9Q96B70 501 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 TBC1D31Q96DN5 1066 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 MBOAT7Q96N66 472 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 STK33Q9BYT3 514 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 CARD9Q9H257 536 aa15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLCNKA-202ENST00000375692 RPTORQ8N122 1335 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 GOLGA6L10A0A0M3HER8 536 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 EML1O00423 815 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 RGS16O15492 202 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 LRRN2O75325 713 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 DNAJC8O75937 253 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 NUDT17P0C025 328 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 TNFAIP3P21580 790 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 FGFR4P22455 802 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 FMO5P49326 533 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 BMT2Q1RMZ1 405 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 USH1GQ495M9 461 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 CCDC38Q502W7 563 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 FAM133BQ5BKY9 247 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 EPS8L3Q8TE67 593 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 SYT11Q9BT88 431 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 VPS33BQ9H267 617 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 DNAJC18Q9H819 358 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 GRHL1Q9NZI5 618 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 GGT7Q9UJ14 662 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 DBR1Q9UK59 544 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 MGRN1O60291 552 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 VIMP08670 466 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 RPL21P46778 160 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 CYP2J2P51589 502 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 MAPK7Q13164 816 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 FER1L6Q2WGJ9 1857 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 NBPF9Q3BBW0 867 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 MYCT1Q8N699 235 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 SYT17Q9BSW7 474 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 CCDC113Q9H0I3 377 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 INTS9Q9NV88 658 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 BAIAP2L1Q9UHR4 511 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 ALG6Q9Y672 507 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 GJA3Q9Y6H8 435 aa15.24■□□□□ 0.03
CLCNKA-202ENST00000375692 ZMYM2Q9UBW7 1377 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 GTPBP10A4D1E9 387 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 GHRP10912 638 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 VCAM1P19320 739 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 PTGIRP43119 386 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 CTTNQ14247 550 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 DLGAP5Q15398 846 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 TTC27Q6P3X3 843 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 PIGWQ7Z7B1 504 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 RDH13Q8NBN7 331 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 SLC20A1Q8WUM9 679 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 TCP11Q8WWU5 503 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 CRYGNQ8WXF5 182 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 PGM2Q96G03 612 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 IDI2Q9BXS1 227 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 SUFUQ9UMX1 484 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 CCDC169A6NNP5 214 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 FOXN3O00409 490 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 MSH4O15457 936 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 SCP2P22307 547 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 RINT1Q6NUQ1 792 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 CCDC50Q8IVM0 306 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 KIRREL3Q8IZU9 778 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 PRELID2Q8N945 189 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 EIF2AK1Q9BQI3 630 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 RABGAP1Q9Y3P9 1069 aa15.23■□□□□ 0.03
CLCNKA-202ENST00000375692 TCRBV7S2A1N4TA0A589 114 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 FAM187AA6NFU0 413 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 ATP6V1G2O95670 118 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 RPSAP08865 295 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 CLTAP09496 248 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 HOXA13P31271 388 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 LLGL1Q15334 1064 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 ACCSLQ4AC99 568 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 TBC1D1Q86TI0 1168 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 ANKS4BQ8N8V4 417 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 INTS2Q9H0H0 1204 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 NOD2Q9HC29 1040 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 TRPC6Q9Y210 931 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 ATP8B3O60423 1300 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 ANKRD63C9JTQ0 380 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 PPP1R12BO60237 982 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 SPDYCQ5MJ68 293 aa15.22■□□□□ 0.03
CLCNKA-202ENST00000375692 PHLDB3Q6NSJ2 640 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms