RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 STRBPQ96SI9 672 aaKnown RBP15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 UGGT1Q9NYU2 1555 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 ARHGEF12Q9NZN5 1544 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 EZH2Q15910 746 aaKnown RBP15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 DEFB128Q7Z7B8 93 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 C11orf74Q86VG3 221 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 OR6J1Q8NGC5 347 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 RAD54LQ92698 747 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 PHLPP2Q6ZVD8 1323 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 ZC3H12BQ5HYM0 836 aaKnown RBP15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 CLEC10AQ8IUN9 316 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 CEP70Q8NHQ1 597 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 DHX38Q92620 1227 aaKnown RBP15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 RMDN1Q96DB5 314 aa15.66■□□□□ 0.1
NOTCH4-201ENST00000375023 A8MXQ7 604 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 PRRG1O14668 218 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 MFAP3LO75121 409 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 PHKA2P46019 1235 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 TRIML2Q8N7C3 387 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 ZBTB18Q99592 522 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 FCER1AP12319 257 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 CDC27P30260 824 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 RESP18Q5W5W9 173 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 FAM180AQ6UWF9 173 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 STAG2Q8N3U4 1231 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 SYT2Q8N9I0 419 aaPredicted RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 ZNF564Q8TBZ8 553 aaPredicted RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 FAM118BQ9BPY3 351 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 WARS2Q9UGM6 360 aaKnown RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 SUN2Q9UH99 717 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 VAMP7P51809 220 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 FAM102AQ5T9C2 384 aaPredicted RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 BEST2Q8NFU1 509 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 CCDC124Q96CT7 223 aaKnown RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 LUC7L3O95232 432 aaKnown RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 RGS7P49802 495 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 COPS2P61201 443 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 UBE3AQ05086 875 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 ENOX1Q8TC92 643 aaKnown RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 SMAD5Q99717 465 aaKnown RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 KCNQ2O43526 872 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 GUCY2CP25092 1073 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 TOB2Q14106 344 aaPredicted RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 TXLNGQ9NUQ3 528 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 LRRC31Q6UY01 552 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 ZFYVE19Q96K21 471 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 LXNQ9BS40 222 aa15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 RPAP3Q9H6T3 665 aaPredicted RBP15.65■□□□□ 0.1
NOTCH4-201ENST00000375023 SYCE1LA8MT33 242 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 SEC24DO94855 1032 aaPredicted RBP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 FTLP02792 175 aaPredicted RBP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 ZBED8Q8IZ13 594 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 ENAHQ8N8S7 591 aaPredicted RBP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 GPR108Q9NPR9 543 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 ASNSD1Q9NWL6 643 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 RCOR1Q9UKL0 485 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 MAPK13O15264 365 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 GYG2O15488 501 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 ZRANB2O95218 330 aaKnown RBP eCLIP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 PAPOLAP51003 745 aaKnown RBP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 JAK3P52333 1124 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 MAGOHP61326 146 aaKnown RBP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 SLC30A5Q8TAD4 765 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 TMEM247A6NEH6 219 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 APBA1Q02410 837 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 SURF1Q15526 300 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 NDUFAF2Q8N183 169 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 FARP1Q9Y4F1 1045 aaPredicted RBP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 DRAP1Q14919 205 aaPredicted RBP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 DCAF4Q8WV16 495 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 VPS39Q96JC1 886 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 CD209Q9NNX6 404 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 PTK2BQ14289 1009 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 FASTKD1Q53R41 847 aaKnown RBP15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 SLC26A7Q8TE54 656 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 GIPC2Q8TF65 315 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 ABHD10Q9NUJ1 306 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 HOXC10Q9NYD6 342 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 TEKT2Q9UIF3 430 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 SCINQ9Y6U3 715 aa15.64■□□□□ 0.09
NOTCH4-201ENST00000375023 GTPBP10A4D1E9 387 aaKnown RBP15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 HMGCS2P54868 508 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 ARL4CP56559 192 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 LRRC63Q05C16 580 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 PDIA2Q13087 525 aaKnown RBP15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 IL31Q6EBC2 164 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 NUDCD3Q8IVD9 361 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 DDX47Q9H0S4 455 aaKnown RBP15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 UPF3AQ9H1J1 476 aaKnown RBP15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 FEM1BQ9UK73 627 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 STRIP2Q9ULQ0 834 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 GGCXP38435 758 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 FOXP4Q8IVH2 680 aaPredicted RBP15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 TRIM55Q9BYV6 548 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 DRC3Q9H069 523 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 INTS2Q9H0H0 1204 aaKnown RBP15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 GPC5P78333 572 aa15.63■□□□□ 0.09
NOTCH4-201ENST00000375023 SDE2Q6IQ49 451 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms