RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 KIAA0391O15091 583 aaKnown RBP28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 TRPA1O75762 1119 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 F2P00734 622 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 SRGAP2CP0DJJ0 459 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 FECHP22830 423 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 SLFN12LQ6IEE8 588 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 C17orf53Q8N3J3 647 aaPredicted RBP28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 RNF186Q9NXI6 227 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 RRN3P2A6NIE6 340 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 CLCN3P51790 818 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 GRIK4Q16099 956 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 LENG1Q96BZ8 264 aaPredicted RBP28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 AGPAT5Q9NUQ2 364 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 STYXL1Q9Y6J8 313 aa28.69■■■□□ 2.18
ATPAF1-202ENST00000371937 DUSP11O75319 330 aaKnown RBP28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 CYBAP13498 195 aa28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 SNRNP35Q16560 246 aaKnown RBP28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 EXOC3L4Q17RC7 722 aa28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 MTHFD1LQ6UB35 978 aa28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 GBP6Q6ZN66 633 aa28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 TMTC1Q8IUR5 882 aa28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 FBXL18Q96ME1 805 aa28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 CRACR2AQ9BSW2 395 aa28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 KIAA1586Q9HCI6 787 aa28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 KCND1Q9NSA2 647 aa28.68■■■□□ 2.18
ATPAF1-202ENST00000371937 ZSWIM8A7E2V4 1837 aa28.67■■■□□ 2.18
ATPAF1-202ENST00000371937 SIP14410 1827 aa28.67■■■□□ 2.18
ATPAF1-202ENST00000371937 HOXD10P28358 340 aa28.67■■■□□ 2.18
ATPAF1-202ENST00000371937 VAMP7P51809 220 aa28.67■■■□□ 2.18
ATPAF1-202ENST00000371937 POU5F1BQ06416 359 aa28.67■■■□□ 2.18
ATPAF1-202ENST00000371937 LINC01465Q8N7H1 131 aa28.67■■■□□ 2.18
ATPAF1-202ENST00000371937 ZNHIT6Q9NWK9 470 aaKnown RBP28.67■■■□□ 2.18
ATPAF1-202ENST00000371937 VEGFBP49765 207 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 MCCD1P59942 119 aaPredicted RBP28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 MAPK6Q16659 721 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 ZPBP2Q6X784 338 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 GPD1LQ8N335 351 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 TRPV1Q8NER1 839 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 LSM14BQ9BX40 385 aaKnown RBP28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 FMO5P49326 533 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 CYP26C1Q6V0L0 522 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 USP37Q86T82 979 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 SAAL1Q96ER3 474 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 NFKBIZQ9BYH8 718 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 CCDC113Q9H0I3 377 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 PLCB1Q9NQ66 1216 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 CEP72Q9P209 647 aa28.66■■■□□ 2.18
ATPAF1-202ENST00000371937 CASP8AP2Q9UKL3 1982 aa28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 NRCAMQ92823 1304 aa28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 GOLGA8IPA6NC78 632 aa28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 GOLGA8JA6NMD2 632 aa28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 FSCN1Q16658 493 aaKnown RBP28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 KIAA0753Q2KHM9 967 aa28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 CACNA2D4Q7Z3S7 1137 aa28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 KAT2BQ92831 832 aa28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 NLRP4Q96MN2 994 aa28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 MRPL4Q9BYD3 311 aaKnown RBP28.65■■■□□ 2.18
ATPAF1-202ENST00000371937 EPHB6O15197 1021 aa28.64■■■□□ 2.18
ATPAF1-202ENST00000371937 CCP110O43303 1012 aa28.64■■■□□ 2.18
ATPAF1-202ENST00000371937 ENPEPQ07075 957 aa28.64■■■□□ 2.18
ATPAF1-202ENST00000371937 CBWD2Q8IUF1 395 aa28.64■■■□□ 2.18
ATPAF1-202ENST00000371937 ZBTB10Q96DT7 871 aa28.64■■■□□ 2.18
ATPAF1-202ENST00000371937 KATNAL1Q9BW62 490 aa28.64■■■□□ 2.18
ATPAF1-202ENST00000371937 TARS2Q9BW92 718 aaKnown RBP28.64■■■□□ 2.18
ATPAF1-202ENST00000371937 MSCO60682 206 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 KPNA6O60684 536 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 N4BP1O75113 896 aaKnown RBP28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 TRIM49P0CI25 452 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 TRIM49CP0CI26 452 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 PTENP60484 403 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 MFSD10Q14728 455 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 MARCH8Q5T0T0 291 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 E4F1Q66K89 784 aaPredicted RBP28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 CCAR2Q8N163 923 aaKnown RBP28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 ZSWIM2Q8NEG5 633 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 MAP7D2Q96T17 732 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 NUCKS1Q9H1E3 243 aaKnown RBP28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 AKT3Q9Y243 479 aa28.64■■■□□ 2.17
ATPAF1-202ENST00000371937 EXTL3O43909 919 aa28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 LDHAP00338 332 aaKnown RBP28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 PRKCBP05771 671 aa28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 MYL3P08590 195 aa28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 PON1P27169 355 aa28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 PHKA2P46019 1235 aa28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 MFSD14AQ96MC6 490 aa28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 GCNT4Q9P109 453 aa28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 SRRDQ9UH36 339 aa28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 AGO2Q9UKV8 859 aaKnown RBP28.63■■■□□ 2.17
ATPAF1-202ENST00000371937 ZNF233A6NK53 670 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 P4HA2O15460 535 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 SEPT4O43236 478 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 NOL4O94818 638 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 ADRB2P07550 413 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 GJB1P08034 283 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 SMIM10L2AP0DMW4 78 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 SMIM10L2BP0DMW5 78 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 BEX3Q00994 111 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 CETN1Q12798 172 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 MEA1Q16626 185 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 TMC2Q8TDI7 906 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms