RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 MAP2K1Q02750 393 aaPredicted RBP19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 SAAL1Q96ER3 474 aa19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 POP1Q99575 1024 aaKnown RBP19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 DEFB129Q9H1M3 183 aa19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 BCCIPQ9P287 314 aaKnown RBP eCLIP19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 ATP8B3O60423 1300 aa19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 CCDC169A6NNP5 214 aa19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 MCF2L2Q86YR7 1114 aa19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 CBWD2Q8IUF1 395 aa19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 TMEM117Q9H0C3 514 aa19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 SLITRK6Q9H5Y7 841 aa19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 UTP11Q9Y3A2 253 aaKnown RBP19.56■□□□□ 0.72
UBQLN4-201ENST00000368309 ATMINO43313 823 aaPredicted RBP19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 CXCL9Q07325 125 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 MYBPC2Q14324 1141 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 XKR9Q5GH70 373 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 FKBP1CQ5VVH2 108 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 PCNX4Q63HM2 1172 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 PPM1KQ8N3J5 372 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 DBR1Q9UK59 544 aaKnown RBP19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 ASTN2O75129 1339 aaPredicted RBP19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 TESPA1A2RU30 521 aaPredicted RBP19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 PHF20L1A8MW92 1017 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 SOX10P56693 466 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 EPC2Q52LR7 807 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 NSMFQ6X4W1 530 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 KRT35Q92764 455 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 LRRC45Q96CN5 670 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 ZNRF3Q9ULT6 936 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 GOLGA6L10A6NI86 522 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 EBAG9O00559 213 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 EGFRP00533 1210 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 ADRB2P07550 413 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 DPEP1P16444 411 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 MARCKSL1P49006 195 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 PCDHB18PQ96TA0 734 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 PSMD1Q99460 953 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 TCEAL9Q9UHQ7 104 aa19.55■□□□□ 0.72
UBQLN4-201ENST00000368309 KIF13BQ9NQT8 1826 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 ANKRD63C9JTQ0 380 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 H0YGN5 161 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 MXI1P50539 228 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 POU5F1Q01860 360 aaKnown RBP19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 KDM7AQ6ZMT4 941 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 RMDN3Q96TC7 470 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 NFS1Q9Y697 457 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 NDUFAB1O14561 156 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 CYP26A1O43174 497 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 CCNE2O96020 404 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 GTF2BQ00403 316 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 DHX9Q08211 1270 aaKnown RBP19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 MESDQ14696 234 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 PGM5Q15124 567 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 NIM1KQ8IY84 436 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 TMBIM4Q9HC24 238 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 BHMG1C9JSJ3 638 aaPredicted RBP19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 MYZAPP0CAP1 466 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 SLC47A2Q86VL8 602 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 EIF1ADQ8N9N8 165 aaKnown RBP19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 CARD9Q9H257 536 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 SLC38A10Q9HBR0 1119 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 STK32BQ9NY57 414 aa19.54■□□□□ 0.72
UBQLN4-201ENST00000368309 ADSSP30520 456 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 CORO7P57737 925 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 ZNF844Q08AG5 666 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 NOP9Q86U38 636 aaKnown RBP19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 FMNL3Q8IVF7 1028 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 SEMA4DQ92854 862 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 TBC1D22BQ9NU19 505 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 RBBP6Q7Z6E9 1792 aaKnown RBP19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 LSP1P33241 339 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 BTBD6Q96KE9 485 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 KREMEN1Q96MU8 473 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 TTC7AQ9ULT0 858 aaPredicted RBP19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 CTDP1Q9Y5B0 961 aaPredicted RBP19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 WDR46O15213 610 aaKnown RBP19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 SEC24CP53992 1094 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 NIPA1Q7RTP0 329 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 CPNE8Q86YQ8 564 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 FAM84AQ96KN4 292 aa19.53■□□□□ 0.72
UBQLN4-201ENST00000368309 HMGB1P1B2RPK0 211 aaPredicted RBP19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 MAPTP10636 758 aaKnown RBP19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 RFX1P22670 979 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 GPC5P78333 572 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 DR1Q01658 176 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 ALCAMQ13740 583 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 LLGL1Q15334 1064 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 RHOT2Q8IXI1 618 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 WNK4Q96J92 1243 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 LRRC4CQ9HCJ2 640 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 MYOZ2Q9NPC6 264 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 TOPORSQ9NS56 1045 aaPredicted RBP19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 ATP8A1Q9Y2Q0 1164 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 CLSTN1O94985 981 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 CHRNB2P17787 502 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 KCNA3P22001 575 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 PTENP60484 403 aa19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 SNRNP35Q16560 246 aaKnown RBP19.52■□□□□ 0.72
UBQLN4-201ENST00000368309 AGBL3Q8NEM8 1001 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms