RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 SUN1O94901 812 aa8.8□□□□□ -1
CD46-208ENST00000367042 SPATA31C1P0DKV0 1188 aa8.8□□□□□ -1
CD46-208ENST00000367042 CREB1P16220 341 aa8.8□□□□□ -1
CD46-208ENST00000367042 HOXA7P31268 230 aaPredicted RBP8.8□□□□□ -1
CD46-208ENST00000367042 PDE6CP51160 858 aa8.8□□□□□ -1
CD46-208ENST00000367042 DHX34Q14147 1143 aaKnown RBP8.8□□□□□ -1
CD46-208ENST00000367042 FAM196AQ6ZSG2 479 aa8.8□□□□□ -1
CD46-208ENST00000367042 CPNE8Q86YQ8 564 aa8.8□□□□□ -1
CD46-208ENST00000367042 SRRM1Q8IYB3 904 aaKnown RBP8.8□□□□□ -1
CD46-208ENST00000367042 EIF1ADQ8N9N8 165 aaKnown RBP8.8□□□□□ -1
CD46-208ENST00000367042 C3orf20Q8ND61 904 aa8.8□□□□□ -1
CD46-208ENST00000367042 ZNF653Q96CK0 615 aa8.8□□□□□ -1
CD46-208ENST00000367042 AGPAT1Q99943 283 aa8.8□□□□□ -1
CD46-208ENST00000367042 KCNMB3Q9NPA1 279 aa8.8□□□□□ -1
CD46-208ENST00000367042 PARP2Q9UGN5 583 aa8.8□□□□□ -1
CD46-208ENST00000367042 POLLQ9UGP5 575 aa8.8□□□□□ -1
CD46-208ENST00000367042 TCEAL9Q9UHQ7 104 aa8.8□□□□□ -1
CD46-208ENST00000367042 EMSYQ7Z589 1322 aa8.8□□□□□ -1
CD46-208ENST00000367042 A0A0A6YYK5 440 aaPredicted RBP8.8□□□□□ -1
CD46-208ENST00000367042 IGF2BP3O00425 579 aaKnown RBP eCLIP8.8□□□□□ -1
CD46-208ENST00000367042 KIAA0391O15091 583 aaKnown RBP8.8□□□□□ -1
CD46-208ENST00000367042 CLDN3O15551 220 aa8.8□□□□□ -1
CD46-208ENST00000367042 TGFB1I1O43294 461 aa8.8□□□□□ -1
CD46-208ENST00000367042 ANP32DO95626 131 aa8.8□□□□□ -1
CD46-208ENST00000367042 ECEL1O95672 775 aa8.8□□□□□ -1
CD46-208ENST00000367042 KRT5P13647 590 aa8.8□□□□□ -1
CD46-208ENST00000367042 POLD1P28340 1107 aa8.8□□□□□ -1
CD46-208ENST00000367042 CHRNA3P32297 505 aa8.8□□□□□ -1
CD46-208ENST00000367042 ADCY8P40145 1251 aa8.8□□□□□ -1
CD46-208ENST00000367042 CLK2P49760 499 aaKnown RBP8.8□□□□□ -1
CD46-208ENST00000367042 SGO2Q562F6 1265 aa8.8□□□□□ -1
CD46-208ENST00000367042 HP1BP3Q5SSJ5 553 aaPredicted RBP8.8□□□□□ -1
CD46-208ENST00000367042 EMC10Q5UCC4 262 aa8.8□□□□□ -1
CD46-208ENST00000367042 CYP4F22Q6NT55 531 aa8.8□□□□□ -1
CD46-208ENST00000367042 RHOT2Q8IXI1 618 aa8.8□□□□□ -1
CD46-208ENST00000367042 SLC30A5Q8TAD4 765 aa8.8□□□□□ -1
CD46-208ENST00000367042 C8orf37Q96NL8 207 aa8.8□□□□□ -1
CD46-208ENST00000367042 FAM167BQ9BTA0 163 aa8.8□□□□□ -1
CD46-208ENST00000367042 GLT8D2Q9H1C3 349 aa8.8□□□□□ -1
CD46-208ENST00000367042 TMX4Q9H1E5 349 aaPredicted RBP8.8□□□□□ -1
CD46-208ENST00000367042 DONSONQ9NYP3 566 aa8.8□□□□□ -1
CD46-208ENST00000367042 NKIRAS1Q9NYS0 192 aa8.8□□□□□ -1
CD46-208ENST00000367042 STXBP5LQ9Y2K9 1186 aa8.8□□□□□ -1
CD46-208ENST00000367042 ANKRD63C9JTQ0 380 aa8.8□□□□□ -1
CD46-208ENST00000367042 PODXLO00592 558 aa8.8□□□□□ -1
CD46-208ENST00000367042 SLC16A3O15427 465 aaKnown RBP8.8□□□□□ -1
CD46-208ENST00000367042 AGTP01019 485 aa8.8□□□□□ -1
CD46-208ENST00000367042 PYGMP11217 842 aa8.8□□□□□ -1
CD46-208ENST00000367042 BRAFP15056 766 aa8.8□□□□□ -1
CD46-208ENST00000367042 GCKP35557 465 aa8.8□□□□□ -1
CD46-208ENST00000367042 GPC5P78333 572 aa8.8□□□□□ -1
CD46-208ENST00000367042 LACTBP83111 547 aaPredicted RBP8.8□□□□□ -1
CD46-208ENST00000367042 XRCC4Q13426 336 aa8.8□□□□□ -1
CD46-208ENST00000367042 SLMAPQ14BN4 828 aa8.8□□□□□ -1
CD46-208ENST00000367042 KYNUQ16719 465 aa8.8□□□□□ -1
CD46-208ENST00000367042 RNF207Q6ZRF8 634 aa8.8□□□□□ -1
CD46-208ENST00000367042 GSTA5Q7RTV2 222 aa8.8□□□□□ -1
CD46-208ENST00000367042 SLFN11Q7Z7L1 901 aa8.8□□□□□ -1
CD46-208ENST00000367042 VSIG1Q86XK7 387 aa8.8□□□□□ -1
CD46-208ENST00000367042 ATG4AQ8WYN0 398 aa8.8□□□□□ -1
CD46-208ENST00000367042 TLCD1Q96CP7 247 aa8.8□□□□□ -1
CD46-208ENST00000367042 HEMGNQ9BXL5 484 aa8.8□□□□□ -1
CD46-208ENST00000367042 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.8□□□□□ -12e-10■■■□□ 19.2
CD46-208ENST00000367042 CCDC88AQ3V6T2 1871 aa8.8□□□□□ -1
CD46-208ENST00000367042 BTAF1O14981 1849 aa8.8□□□□□ -1
CD46-208ENST00000367042 SRRM3A6NNA2 597 aaPredicted RBP8.79□□□□□ -1
CD46-208ENST00000367042 A8MUI8 341 aa8.79□□□□□ -1
CD46-208ENST00000367042 RIPK2O43353 540 aa8.79□□□□□ -1
CD46-208ENST00000367042 EYA4O95677 639 aa8.79□□□□□ -1
CD46-208ENST00000367042 SHMT1P34896 483 aa8.79□□□□□ -1
CD46-208ENST00000367042 JAM2P57087 298 aa8.79□□□□□ -1
CD46-208ENST00000367042 ATP11AP98196 1134 aa8.79□□□□□ -1
CD46-208ENST00000367042 KLRC3Q07444 240 aa8.79□□□□□ -1
CD46-208ENST00000367042 C2CD6Q53TS8 623 aa8.79□□□□□ -1
CD46-208ENST00000367042 HYIQ5T013 277 aa8.79□□□□□ -1
CD46-208ENST00000367042 PHLDB3Q6NSJ2 640 aa8.79□□□□□ -1
CD46-208ENST00000367042 TTC27Q6P3X3 843 aa8.79□□□□□ -1
CD46-208ENST00000367042 ZFPM1Q8IX07 1006 aa8.79□□□□□ -1
CD46-208ENST00000367042 PRELID2Q8N945 189 aa8.79□□□□□ -1
CD46-208ENST00000367042 TBC1D16Q8TBP0 767 aa8.79□□□□□ -1
CD46-208ENST00000367042 P3H4Q92791 437 aa8.79□□□□□ -1
CD46-208ENST00000367042 KAT5Q92993 513 aa8.79□□□□□ -1
CD46-208ENST00000367042 RBM17Q96I25 401 aaKnown RBP8.79□□□□□ -1
CD46-208ENST00000367042 NGLY1Q96IV0 654 aa8.79□□□□□ -1
CD46-208ENST00000367042 LBHD1Q9BQE6 289 aaPredicted RBP8.79□□□□□ -1
CD46-208ENST00000367042 NUP85Q9BW27 656 aa8.79□□□□□ -1
CD46-208ENST00000367042 INTUQ9ULD6 942 aa8.79□□□□□ -1
CD46-208ENST00000367042 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.79□□□□□ -1
CD46-208ENST00000367042 TRIM33Q9UPN9 1127 aa8.79□□□□□ -1
CD46-208ENST00000367042 SCN7AQ01118 1682 aa8.79□□□□□ -1
CD46-208ENST00000367042 F5H6K3 240 aa8.79□□□□□ -1
CD46-208ENST00000367042 MEIS2O14770 477 aa8.79□□□□□ -1
CD46-208ENST00000367042 CYP26A1O43174 497 aa8.79□□□□□ -1
CD46-208ENST00000367042 MMP13P45452 471 aa8.79□□□□□ -1
CD46-208ENST00000367042 NPEPPSP55786 919 aa8.79□□□□□ -1
CD46-208ENST00000367042 DLG4P78352 724 aa8.79□□□□□ -1
CD46-208ENST00000367042 KRT17Q04695 432 aa8.79□□□□□ -1
CD46-208ENST00000367042 INTS8Q75QN2 995 aaKnown RBP8.79□□□□□ -1
CD46-208ENST00000367042 ZNF564Q8TBZ8 553 aaPredicted RBP8.79□□□□□ -1
CD46-208ENST00000367042 AGAP11Q8TF27 550 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms