RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ARL4AP40617 200 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 IRX1P78414 480 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 DTNBP1Q96EV8 351 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 SEC16BQ96JE7 1060 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 ZNF185O15231 689 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 AP5Z1O43299 807 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 CATSPER1Q8NEC5 780 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 MOXD1Q6UVY6 613 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 ZNF662Q6ZS27 426 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 GLYCTKQ8IVS8 523 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 SPICE1Q8N0Z3 855 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 NRBF2Q96F24 287 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 CALN1Q9BXU9 219 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 A0A0A6YYK5 440 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 TMEM253P0C7T8 217 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 METTL13Q8N6R0 699 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 GSDMBQ8TAX9 411 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 LRGUKQ96M69 825 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 MYO18AQ92614 2054 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 HAUS5O94927 633 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 ZNF543Q08ER8 600 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 CEP55Q53EZ4 464 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 ZNF449Q6P9G9 518 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 CYFIP1Q7L576 1253 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 CCDC24Q8N4L8 307 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 ACTRT1Q8TDG2 376 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 K7ERI5 159 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 CAPN9O14815 690 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 QARSP47897 775 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 GCOM2Q9BZD3 368 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 FAF1Q9UNN5 650 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 KIRREL3Q8IZU9 778 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 AGPAT1Q99943 283 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 MTMR4Q9NYA4 1195 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 LRRC10BA6NIK2 292 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 TCP11X1B4DZS4 312 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 QRICH1Q2TAL8 776 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 NXNQ6DKJ4 435 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 BTNL9Q6UXG8 535 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 ERICH1Q86X53 443 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 MYMKA6NI61 221 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L15C9J2P7 530 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L13C9JLJ4 530 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L11C9JVI0 530 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L18D6R9N7 530 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L22D6RA61 530 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L17D6RBQ6 530 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L19D6RCP7 530 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L20D6RJB6 530 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 SERPINB2P05120 415 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L24Q0WX57 530 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 CTTNQ14247 550 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP17L6PQ6QN14 398 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 KDM4CQ9H3R0 1056 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 GEMIN8Q9NWZ8 242 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 DONSONQ9NYP3 566 aa12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 APOBEC2Q9Y235 224 aaKnown RBP12.57□□□□□ -0.4
CDC42BPA-202ENST00000366764 E9PMD0 336 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 KRT14P02533 472 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 TMPRSS15P98073 1019 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 HIF1AQ16665 826 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 CENPPQ6IPU0 288 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 SCYL2Q6P3W7 929 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 PODNQ7Z5L7 613 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 UBN1Q9NPG3 1134 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 RIMS1Q86UR5 1692 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 SPECC1L-ADORA2AF8WAN1 911 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 TNFRSF8P28908 595 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 ZBTB17Q13105 803 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 PABPC3Q9H361 631 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 FRMD3A2A2Y4 597 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 GCLMP48507 274 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 TOB1P50616 345 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 ERVK-24P63145 666 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 GFM2Q969S9 779 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 SCYL1Q96KG9 808 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 MSTO1Q9BUK6 570 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 ANKZF1Q9H8Y5 726 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 USP21Q9UK80 565 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 GPC4O75487 556 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 TFAMQ00059 246 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 ZIM3Q96PE6 472 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 EIF2AK1Q9BQI3 630 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 FRMD8Q9BZ67 464 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 MRPS25P82663 173 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 UPF3AQ9H1J1 476 aaKnown RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 STX1BP61266 288 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 PIGOQ8TEQ8 1089 aa12.56□□□□□ -0.4
CDC42BPA-202ENST00000366764 LXNQ9BS40 222 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms