RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ERGIC2Q96RQ1 377 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 MAP3K14Q99558 947 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 EPN3Q9H201 632 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 RNF146Q9NTX7 359 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 PLAGL2Q9UPG8 496 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 DUSP10Q9Y6W6 482 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 SPDYE16A6NNV3 312 aaPredicted RBP14.63□□□□□ -0.07
VCP-201ENST00000358901 CLGNO14967 610 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 TRPA1O75762 1119 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 SCP2P22307 547 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 RFX1P22670 979 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
VCP-201ENST00000358901 GRAMD1BQ3KR37 738 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 LMBRD2Q68DH5 695 aaPredicted RBP14.63□□□□□ -0.07
VCP-201ENST00000358901 ZBED8Q8IZ13 594 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 KLC2Q9H0B6 622 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 PPRC1Q5VV67 1664 aaKnown RBP14.63□□□□□ -0.07
VCP-201ENST00000358901 ZWINTO95229 277 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 CALB1P05937 261 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 PDHBP11177 359 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 KRT17Q04695 432 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 PDIA2Q13087 525 aaKnown RBP14.63□□□□□ -0.07
VCP-201ENST00000358901 ZNF699Q32M78 642 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 HSP90AA5PQ58FG0 334 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 SLC27A3Q5K4L6 730 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 CIAPIN1Q6FI81 312 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 ZNF668Q96K58 619 aaPredicted RBP14.63□□□□□ -0.07
VCP-201ENST00000358901 TTC25Q96NG3 672 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 STK33Q9BYT3 514 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 ADAM33Q9BZ11 813 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 KLC4Q9NSK0 619 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 EPS15L1Q9UBC2 864 aa14.63□□□□□ -0.07
VCP-201ENST00000358901 KRT38O76015 456 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 PSMC5P62195 406 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 SPP2Q13103 211 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 PRPF38AQ8NAV1 312 aaKnown RBP14.62□□□□□ -0.07
VCP-201ENST00000358901 OR6B3Q8NGW1 331 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 ZNF473Q8WTR7 871 aaKnown RBP14.62□□□□□ -0.07
VCP-201ENST00000358901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.62□□□□□ -0.07
VCP-201ENST00000358901 SPDL1Q96EA4 605 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 PHF20L1A8MW92 1017 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 ECE2O60344 883 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 SSTR3P32745 418 aaPredicted RBP14.62□□□□□ -0.07
VCP-201ENST00000358901 LSP1P33241 339 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 FMO5P49326 533 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 STX1BP61266 288 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 NAB2Q15742 525 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 EDRF1Q3B7T1 1238 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 SLC30A5Q8TAD4 765 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 MORC4Q8TE76 937 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 APEX2Q9UBZ4 518 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 ZFP69BQ9UJL9 534 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 FEM1BQ9UK73 627 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 SPAG7O75391 227 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 CNGA1P29973 690 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 SNRNP48Q6IEG0 339 aaKnown RBP14.62□□□□□ -0.07
VCP-201ENST00000358901 CYFIP1Q7L576 1253 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 NSUN6Q8TEA1 469 aaKnown RBP14.62□□□□□ -0.07
VCP-201ENST00000358901 RUBCNQ92622 972 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 SNF8Q96H20 258 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 CALR3Q96L12 384 aaKnown RBP14.62□□□□□ -0.07
VCP-201ENST00000358901 LACRTQ9GZZ8 138 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 FAF1Q9UNN5 650 aaPredicted RBP14.62□□□□□ -0.07
VCP-201ENST00000358901 INO80Q9ULG1 1556 aaPredicted RBP14.62□□□□□ -0.07
VCP-201ENST00000358901 UBE4BO95155 1302 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 SRGAP2BP0DMP2 458 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 MYBP10242 640 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 SIX6OS1Q8N1H7 587 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 TTLL6Q8N841 843 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 PDZD8Q8NEN9 1154 aa14.62□□□□□ -0.07
VCP-201ENST00000358901 BAZ2BQ9UIF8 2168 aaKnown RBP14.62□□□□□ -0.07
VCP-201ENST00000358901 NEXMIFQ5QGS0 1516 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 PLEKHG2Q9H7P9 1386 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 ATP5HO75947 161 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 NDUFB10O96000 172 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 OATP04181 439 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 C4orf50Q6ZRC1 276 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 LDHDQ86WU2 507 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 PARP9Q8IXQ6 854 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 IPO11Q9UI26 975 aaKnown RBP14.61□□□□□ -0.07
VCP-201ENST00000358901 ANGPTL2Q9UKU9 493 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 AK9Q5TCS8 1911 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 TCP11X1B4DZS4 312 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 HAUS5O94927 633 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 TTC4O95801 387 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 MX2P20592 715 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 PSMC1P62191 440 aaKnown RBP14.61□□□□□ -0.07
VCP-201ENST00000358901 CCNA1P78396 465 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 FBXO33Q7Z6M2 555 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 ZC3H18Q86VM9 953 aaKnown RBP14.61□□□□□ -0.07
VCP-201ENST00000358901 MYLK4Q86YV6 388 aaPredicted RBP14.61□□□□□ -0.07
VCP-201ENST00000358901 C9orf72Q96LT7 481 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 SLC9A2Q9UBY0 812 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 L1RE1Q9UN81 338 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 EIF4E1BA6NMX2 242 aaKnown RBP14.61□□□□□ -0.07
VCP-201ENST00000358901 SFNP31947 248 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 ART3Q13508 389 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 ZNF568Q3ZCX4 644 aa14.61□□□□□ -0.07
VCP-201ENST00000358901 ZC2HC1CQ53FD0 456 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms