RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 CCDC134Q9H6E4 229 aa19.17■□□□□ 0.66
VHL-202ENST00000345392 MTRF1LQ9UGC7 380 aaKnown RBP19.17■□□□□ 0.66
VHL-202ENST00000345392 CNOT7Q9UIV1 285 aaKnown RBP19.17■□□□□ 0.66
VHL-202ENST00000345392 TRIM33Q9UPN9 1127 aa19.17■□□□□ 0.66
VHL-202ENST00000345392 SLC16A3O15427 465 aaKnown RBP19.17■□□□□ 0.66
VHL-202ENST00000345392 TTLL1O95922 423 aa19.17■□□□□ 0.66
VHL-202ENST00000345392 CERS5Q8N5B7 392 aa19.17■□□□□ 0.66
VHL-202ENST00000345392 P2RX7Q99572 595 aaKnown RBP19.17■□□□□ 0.66
VHL-202ENST00000345392 SYT11Q9BT88 431 aa19.17■□□□□ 0.66
VHL-202ENST00000345392 DDX23Q9BUQ8 820 aaKnown RBP19.17■□□□□ 0.66
VHL-202ENST00000345392 USP40Q9NVE5 1235 aa19.17■□□□□ 0.66
VHL-202ENST00000345392 CTTNBP2NLQ9P2B4 639 aa19.17■□□□□ 0.66
VHL-202ENST00000345392 USP15Q9Y4E8 981 aaPredicted RBP19.17■□□□□ 0.66
VHL-202ENST00000345392 PCDHAC2Q9Y5I4 1007 aa19.17■□□□□ 0.66
VHL-202ENST00000345392 CLGNO14967 610 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 KRT16P08779 473 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 FMO5P49326 533 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 GABPAQ06546 454 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 NUGGCQ68CJ6 796 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 SLC30A10Q6XR72 485 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 ZFPM1Q8IX07 1006 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 ANKRD42Q8N9B4 389 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 POP1Q99575 1024 aaKnown RBP19.16■□□□□ 0.66
VHL-202ENST00000345392 PCDHA3Q9Y5H8 950 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 PCDHA1Q9Y5I3 950 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 KIF13BQ9NQT8 1826 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 GAKO14976 1311 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 MYO3BQ8WXR4 1341 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 GTPBP10A4D1E9 387 aaKnown RBP19.16■□□□□ 0.66
VHL-202ENST00000345392 TBCAO75347 108 aaKnown RBP19.16■□□□□ 0.66
VHL-202ENST00000345392 ATP2B4P23634 1241 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 DOK7Q18PE1 504 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 CCDC105Q8IYK2 499 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 MAB21L3Q8N8X9 362 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 SLC20A1Q8WUM9 679 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 KLHL29Q96CT2 875 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 ZNF570Q96NI8 536 aa19.16■□□□□ 0.66
VHL-202ENST00000345392 ANKRD62A6NC57 917 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 ACSL3O95573 720 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 APBA3O96018 575 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 RPA1P27694 616 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 CHRNA3P32297 505 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 SLC8A3P57103 927 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 NFIAQ12857 509 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 ZKSCAN8Q15776 578 aaPredicted RBP19.15■□□□□ 0.66
VHL-202ENST00000345392 BZW1Q7L1Q6 419 aaKnown RBP19.15■□□□□ 0.66
VHL-202ENST00000345392 TAOK1Q7L7X3 1001 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 CPNE8Q86YQ8 564 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 SLFN12Q8IYM2 578 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 RDH13Q8NBN7 331 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 GDAP1Q8TB36 358 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 PIGOQ8TEQ8 1089 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 RGL1Q9NZL6 768 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 FOXN3O00409 490 aaPredicted RBP19.15■□□□□ 0.66
VHL-202ENST00000345392 SERPINB2P05120 415 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 PSMC2P35998 433 aaKnown RBP19.15■□□□□ 0.66
VHL-202ENST00000345392 NAIF1Q69YI7 327 aaPredicted RBP19.15■□□□□ 0.66
VHL-202ENST00000345392 FMNL3Q8IVF7 1028 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 ETNPPLQ8TBG4 499 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 SERPINB13Q9UIV8 391 aa19.15■□□□□ 0.66
VHL-202ENST00000345392 TMEM120BA0PK00 339 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 OAS1P00973 400 aaKnown RBP19.14■□□□□ 0.65
VHL-202ENST00000345392 SHMT1P34896 483 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 CYP2J2P51589 502 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 MAP2K1Q02750 393 aaPredicted RBP19.14■□□□□ 0.65
VHL-202ENST00000345392 TCP10Q12799 353 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 MESDQ14696 234 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 QRICH1Q2TAL8 776 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 TNFAIP8L3Q5GJ75 292 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 ZNF746Q6NUN9 644 aaPredicted RBP19.14■□□□□ 0.65
VHL-202ENST00000345392 ERICH1Q86X53 443 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 ARHGEF2Q92974 986 aaKnown RBP19.14■□□□□ 0.65
VHL-202ENST00000345392 KCNK9Q9NPC2 374 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 NOP53Q9NZM5 478 aaKnown RBP19.14■□□□□ 0.65
VHL-202ENST00000345392 CTNNAL1Q9UBT7 734 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 PODXLO00592 558 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 PYGMP11217 842 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 RARGP13631 454 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 ARHGAP4P98171 946 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 BMT2Q1RMZ1 405 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 GALNTL6Q49A17 601 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 ERMNQ8TAM6 284 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 DNAJC17Q9NVM6 304 aaKnown RBP19.14■□□□□ 0.65
VHL-202ENST00000345392 PCYOX1Q9UHG3 505 aa19.14■□□□□ 0.65
VHL-202ENST00000345392 SYNGAP1Q96PV0 1343 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 IGKV6D-41A0A0C4DH26 115 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 GH1P01241 217 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 FTLP02792 175 aaPredicted RBP19.13■□□□□ 0.65
VHL-202ENST00000345392 COPS2P61201 443 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 ADCY1Q08828 1119 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 PHLDB3Q6NSJ2 640 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 MYCT1Q8N699 235 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 FITM2Q8N6M3 262 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 UBL4BQ8N7F7 174 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 CCHCR1Q8TD31 782 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 SPDL1Q96EA4 605 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 INTS2Q9H0H0 1204 aaKnown RBP19.13■□□□□ 0.65
VHL-202ENST00000345392 HOMER3Q9NSC5 361 aa19.13■□□□□ 0.65
VHL-202ENST00000345392 PFASO15067 1338 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms