RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 GAP43P17677 238 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 HOXD13P35453 343 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 MIIPQ5JXC2 388 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 HYIQ5T013 277 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 CYP4F22Q6NT55 531 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 CEP89Q96ST8 783 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 TTYH3Q9C0H2 523 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 TOPORSQ9NS56 1045 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-201ENST00000342220 TYW1Q9NV66 732 aaKnown RBP14.17□□□□□ -0.14
COL18A1-201ENST00000342220 SAR1BQ9Y6B6 198 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 SUPT20HL2P0C7V6 817 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 RNASE9P60153 205 aaKnown RBP14.17□□□□□ -0.14
COL18A1-201ENST00000342220 KCTD19Q17RG1 926 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-201ENST00000342220 CBWD2Q8IUF1 395 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 NHEJ1Q9H9Q4 299 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-201ENST00000342220 AGPAT3Q9NRZ7 376 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 PNMA2Q9UL42 364 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-201ENST00000342220 TNNI1P19237 187 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 PPP1R2P41236 205 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 DLG4P78352 724 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 MEA1Q16626 185 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 RNF149Q8NC42 400 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 SEPT1Q8WYJ6 367 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 AKT3Q9Y243 479 aa14.17□□□□□ -0.14
COL18A1-201ENST00000342220 TGFB1I1O43294 461 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 BUB1O43683 1085 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 SLC25A27O95847 323 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 HOXA7P31268 230 aaPredicted RBP14.16□□□□□ -0.14
COL18A1-201ENST00000342220 KRT83P78385 493 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 STRN3Q13033 797 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 EMC2Q15006 297 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 SPRYD7Q5W111 196 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 PHLDB2Q86SQ0 1253 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 THNSL1Q8IYQ7 743 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 TARS2Q9BW92 718 aaKnown RBP14.16□□□□□ -0.14
COL18A1-201ENST00000342220 KCTD10Q9H3F6 313 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 ATP6V0A4Q9HBG4 840 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 PSD3Q9NYI0 1048 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 RPTORQ8N122 1335 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 ANKRD63C9JTQ0 380 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 K7ERI5 159 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 ZNF185O15231 689 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 ZMYND10O75800 440 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 CNMDO75829 334 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 BCRP11274 1271 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 PLS3P13797 630 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 PSMC2P35998 433 aaKnown RBP14.16□□□□□ -0.14
COL18A1-201ENST00000342220 EIF4A3P38919 411 aaKnown RBP14.16□□□□□ -0.14
COL18A1-201ENST00000342220 NEDD9Q14511 834 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 ZNF746Q6NUN9 644 aaPredicted RBP14.16□□□□□ -0.14
COL18A1-201ENST00000342220 PPM1KQ8N3J5 372 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 ADAMTS1Q9UHI8 967 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 STK24Q9Y6E0 443 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 SPATA31C2B4DYI2 1134 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 GFPT2O94808 682 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 AFPP02771 609 aaKnown RBP14.16□□□□□ -0.14
COL18A1-201ENST00000342220 CYLC1P35663 651 aaPredicted RBP14.16□□□□□ -0.14
COL18A1-201ENST00000342220 TTLL4Q14679 1199 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 FAM47CQ5HY64 1035 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 WDR93Q6P2C0 686 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 DPH6Q7L8W6 267 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 CALR3Q96L12 384 aaKnown RBP14.16□□□□□ -0.14
COL18A1-201ENST00000342220 ACCSQ96QU6 501 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 PI4K2AQ9BTU6 479 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 NRBP2Q9NSY0 501 aa14.16□□□□□ -0.14
COL18A1-201ENST00000342220 CHORDC1Q9UHD1 332 aaPredicted RBP14.16□□□□□ -0.14
COL18A1-201ENST00000342220 TNPO2O14787 897 aaKnown RBP14.15□□□□□ -0.14
COL18A1-201ENST00000342220 KRT86O43790 486 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 CALCAP01258 141 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 GFPT1Q06210 699 aaPredicted RBP14.15□□□□□ -0.14
COL18A1-201ENST00000342220 NBPF20Q3BBV1 942 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 LDLRAD1Q5T700 205 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 PAPD7Q5XG87 772 aaKnown RBP14.15□□□□□ -0.14
COL18A1-201ENST00000342220 GDAP1L1Q96MZ0 367 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 ADAMTS5Q9UNA0 930 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 PCDHA2Q9Y5H9 948 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 OATP04181 439 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 FGFR4P22455 802 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 KLHL30Q0D2K2 578 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 CCL14Q16627 93 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 HSP90B2PQ58FF3 399 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 XKR3Q5GH77 459 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 GPR142Q7Z601 462 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 TADA2BQ86TJ2 420 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 HOMEZQ8IX15 550 aa14.15□□□□□ -0.14
COL18A1-201ENST00000342220 FRMPD4Q14CM0 1322 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 FARP2O94887 1054 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-201ENST00000342220 ABCB4P21439 1286 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 ZBED6P86452 979 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-201ENST00000342220 C4orf19Q8IY42 314 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 ACP6Q9NPH0 428 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 KCNH4Q9UQ05 1017 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 EMSYQ7Z589 1322 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 PDE2AO00408 941 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-201ENST00000342220 IGF2BP3O00425 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL18A1-201ENST00000342220 PPP1R12AO14974 1030 aaPredicted RBP14.14□□□□□ -0.15
COL18A1-201ENST00000342220 VTNP04004 478 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 MAPK7Q13164 816 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms