RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 BORCS6Q96GS4 357 aa8.58□□□□□ -1.04
TMC1-202ENST00000340019 MAP7D2Q96T17 732 aa8.58□□□□□ -1.04
TMC1-202ENST00000340019 CBWD1Q9BRT8 395 aa8.58□□□□□ -1.04
TMC1-202ENST00000340019 FZD8Q9H461 694 aa8.58□□□□□ -1.04
TMC1-202ENST00000340019 RTN4Q9NQC3 1192 aaKnown RBP8.58□□□□□ -1.04
TMC1-202ENST00000340019 MAGEC2Q9UBF1 373 aaPredicted RBP8.58□□□□□ -1.04
TMC1-202ENST00000340019 STYXL1Q9Y6J8 313 aa8.58□□□□□ -1.04
TMC1-202ENST00000340019 A0A087WZ62 844 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 SLC16A3O15427 465 aaKnown RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 IQCF3P0C7M6 154 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 CASP4P49662 377 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 COPB1P53618 953 aaKnown RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 STRN3Q13033 797 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 GDF6Q6KF10 455 aaPredicted RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 ZNF410Q86VK4 478 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 ZBTB8OSQ8IWT0 167 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 FDXACB1Q9BRP7 624 aaPredicted RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 TUBGCP2Q9BSJ2 902 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 MKNK1Q9BUB5 465 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 ADAMTS10Q9H324 1103 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 MINDY3Q9H8M7 445 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 HNRNPDLO14979 420 aaKnown RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 CBFA2T2O43439 604 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 CCL5P13501 91 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 LBX1P52954 281 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 CDC42EP1Q00587 391 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 MAPK6Q16659 721 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 FAM187BQ17R55 369 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 MIIPQ5JXC2 388 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 ZPBP2Q6X784 338 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 FRMD5Q7Z6J6 570 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 TRIM59Q8IWR1 403 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 ARRDC4Q8NCT1 418 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 ANKRD20A12PQ8NF67 263 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 ZNF668Q96K58 619 aaPredicted RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 TAB2Q9NYJ8 693 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 PHF24Q9UPV7 400 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 TTLL13PA6NNM8 815 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 HSPA1AP0DMV8 641 aaKnown RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 HSPA1BP0DMV9 641 aaKnown RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 GARTP22102 1010 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 PHKA2P46019 1235 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 NLRP11P59045 1033 aaKnown RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 MCCD1P59942 119 aaPredicted RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 AMHR2Q16671 573 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 TAF2Q6P1X5 1199 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 FBXO46Q6PJ61 603 aaPredicted RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 DNAJB3Q8WWF6 145 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 HAPLN2Q9GZV7 340 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 FAM49AQ9H0Q0 323 aaPredicted RBP8.57□□□□□ -1.04
TMC1-202ENST00000340019 VPS16Q9H269 839 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 HSPBP1Q9NZL4 362 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 OGDHLQ9ULD0 1010 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 USP20Q9Y2K6 914 aa8.57□□□□□ -1.04
TMC1-202ENST00000340019 A0A1W2PQ45 241 aaPredicted RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 A0A1W2PQY0 241 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 DNM1LO00429 736 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 ACKR2O00590 384 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 TEX33O43247 280 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 PRKCBP05771 671 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 PSMC2P35998 433 aaKnown RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 PBX1P40424 430 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 CTCFP49711 727 aaPredicted RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 CYP2J2P51589 502 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 PTPN11Q06124 597 aaPredicted RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 ITGA7Q13683 1181 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 CEP135Q66GS9 1140 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 ARMCX5Q6P1M9 558 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 RPAINQ86UA6 219 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 SERINC5Q86VE9 423 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 CREBRFQ8IUR6 639 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 ZNF710Q8N1W2 664 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 NME8Q8N427 588 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 SLC43A3Q8NBI5 491 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 ZSWIM2Q8NEG5 633 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 ZNF333Q96JL9 665 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 FBXL18Q96ME1 805 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 GLT1D1Q96MS3 346 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 DEFB118Q96PH6 123 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 TARS2Q9BW92 718 aaKnown RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 MRPL4Q9BYD3 311 aaKnown RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 LGALS16A8MUM7 142 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 ABLIM1O14639 778 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 MAPK13O15264 365 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 PROZP22891 400 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 MTIF2P46199 727 aaKnown RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 LIG4P49917 911 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 PKN2Q16513 984 aaKnown RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 MAN2A1Q16706 1144 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 KIZQ2M2Z5 673 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 FILIP1LQ4L180 1135 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 TSHZ1Q6ZSZ6 1077 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 SRGAP1Q7Z6B7 1085 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 XXYLT1Q8NBI6 393 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 NLRP7Q8WX94 980 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 PPP1R16BQ96T49 567 aa8.56□□□□□ -1.04
TMC1-202ENST00000340019 ACO2Q99798 780 aaKnown RBP8.56□□□□□ -1.04
TMC1-202ENST00000340019 PCIF1Q9H4Z3 704 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms