RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 SCP2P22307 547 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 HOXA11P31270 313 aaPredicted RBP19.24■□□□□ 0.67
CHGA-202ENST00000334654 CD52P31358 61 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 PRCPP42785 496 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 ALCAMQ13740 583 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 MAPK6Q16659 721 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 L1TD1Q5T7N2 865 aaKnown RBP19.24■□□□□ 0.67
CHGA-202ENST00000334654 MFSD5Q6N075 450 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 TSHZ1Q6ZSZ6 1077 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 MAP4K3Q8IVH8 894 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 USP38Q8NB14 1042 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 DPF3Q92784 378 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 HVCN1Q96D96 273 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 PADI3Q9ULW8 664 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 ST3GAL5Q9UNP4 418 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 CEP290O15078 2479 aa19.24■□□□□ 0.67
CHGA-202ENST00000334654 PPP1R3GB7ZBB8 358 aa19.23■□□□□ 0.67
CHGA-202ENST00000334654 TSPAN1O60635 241 aa19.23■□□□□ 0.67
CHGA-202ENST00000334654 TCTN1Q2MV58 587 aa19.23■□□□□ 0.67
CHGA-202ENST00000334654 GUF1Q8N442 669 aaKnown RBP19.23■□□□□ 0.67
CHGA-202ENST00000334654 FUCA2Q9BTY2 467 aa19.23■□□□□ 0.67
CHGA-202ENST00000334654 TMX1Q9H3N1 280 aa19.23■□□□□ 0.67
CHGA-202ENST00000334654 PRMT7Q9NVM4 692 aaPredicted RBP19.23■□□□□ 0.67
CHGA-202ENST00000334654 MAPK8IP1Q9UQF2 711 aa19.23■□□□□ 0.67
CHGA-202ENST00000334654 ZMYM2Q9UBW7 1377 aa19.23■□□□□ 0.67
CHGA-202ENST00000334654 PARNO95453 639 aaKnown RBP19.22■□□□□ 0.67
CHGA-202ENST00000334654 PIGRP01833 764 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 NLRP12P59046 1061 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 PCBP1Q15365 356 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHGA-202ENST00000334654 ZSCAN23Q3MJ62 389 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 PLEKHG4Q58EX7 1191 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 SLC39A4Q6P5W5 647 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 ADSSL1Q8N142 457 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 PRIMPOLQ96LW4 560 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 ACO2Q99798 780 aaKnown RBP19.22■□□□□ 0.67
CHGA-202ENST00000334654 KCTD10Q9H3F6 313 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 TNRC18O15417 2968 aaPredicted RBP19.22■□□□□ 0.67
CHGA-202ENST00000334654 ABLIM1O14639 778 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 TGFB1I1O43294 461 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 LETM1O95202 739 aaPredicted RBP19.22■□□□□ 0.67
CHGA-202ENST00000334654 CSF2RAP15509 400 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 SYN1P17600 705 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 ARF4P18085 180 aaPredicted RBP19.22■□□□□ 0.67
CHGA-202ENST00000334654 SFPQP23246 707 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHGA-202ENST00000334654 ABCD1P33897 745 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 CATSPER4Q7RTX7 472 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 NELFCDQ8IXH7 590 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 MYOCDQ8IZQ8 938 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 ACCSQ96QU6 501 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 TARS2Q9BW92 718 aaKnown RBP19.22■□□□□ 0.67
CHGA-202ENST00000334654 GTPBP4Q9BZE4 634 aaKnown RBP19.22■□□□□ 0.67
CHGA-202ENST00000334654 AGPAT5Q9NUQ2 364 aa19.22■□□□□ 0.67
CHGA-202ENST00000334654 ZMYND8Q9ULU4 1186 aaPredicted RBP19.22■□□□□ 0.67
CHGA-202ENST00000334654 UBE4BO95155 1302 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 CNTNAP2Q9UHC6 1331 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 SYCE3A1L190 88 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 TISP43B9A030 160 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 ANKRD63C9JTQ0 380 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 GPR182O15218 404 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 MGEA5O60502 916 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 RFC2P35250 354 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 NFX1Q12986 1120 aaKnown RBP19.21■□□□□ 0.67
CHGA-202ENST00000334654 STRN3Q13033 797 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 PRPF4BQ13523 1007 aaKnown RBP19.21■□□□□ 0.67
CHGA-202ENST00000334654 DSC3Q14574 896 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 KNOP1Q1ED39 458 aaKnown RBP19.21■□□□□ 0.67
CHGA-202ENST00000334654 DPCR1Q3MIW9 517 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 STXBP4Q6ZWJ1 553 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 DBF4BQ8NFT6 615 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 BADQ92934 168 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 CPB2Q96IY4 423 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 ZBTB45Q96K62 511 aaPredicted RBP19.21■□□□□ 0.67
CHGA-202ENST00000334654 IFIH1Q9BYX4 1025 aaKnown RBP19.21■□□□□ 0.67
CHGA-202ENST00000334654 PTPRHQ9HD43 1115 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 PRKAG2Q9UGJ0 569 aa19.21■□□□□ 0.67
CHGA-202ENST00000334654 A0A1B0GUA9 196 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 ERLIN2O94905 339 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 PROZP22891 400 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 PAK2Q13177 524 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 EEF1DP3Q658K8 133 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 ZPBP2Q6X784 338 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 C16orf59Q7L2K0 433 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 DEFB128Q7Z7B8 93 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 RTN4RL1Q86UN2 441 aaPredicted RBP19.2■□□□□ 0.66
CHGA-202ENST00000334654 TMEM199Q8N511 208 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 MED15Q96RN5 788 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 MRPL4Q9BYD3 311 aaKnown RBP19.2■□□□□ 0.66
CHGA-202ENST00000334654 HAPLN2Q9GZV7 340 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 SEMA6BQ9H3T3 888 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 STYXL1Q9Y6J8 313 aa19.2■□□□□ 0.66
CHGA-202ENST00000334654 ADSSP30520 456 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 AXLP30530 894 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 TYRO3Q06418 890 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 ZCWPW2Q504Y3 356 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 CENPPQ6IPU0 288 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 SASS6Q6UVJ0 657 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 CDR2LQ86X02 465 aaPredicted RBP19.19■□□□□ 0.66
CHGA-202ENST00000334654 MLKLQ8NB16 471 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 LINC01599Q8WXQ3 324 aa19.19■□□□□ 0.66
CHGA-202ENST00000334654 PDZD7Q9H5P4 517 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms