RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 CTTNBP2NLQ9P2B4 639 aa25.27■■□□□ 1.64
NDEL1-201ENST00000334527 USP8P40818 1118 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 MDH1P40925 334 aaKnown RBP25.26■■□□□ 1.63
NDEL1-201ENST00000334527 DR1Q01658 176 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 MTMR1Q13613 665 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 HAUS6Q7Z4H7 955 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 CPXCR1Q8N123 301 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 PPM1EQ8WY54 764 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 VTI1AQ96AJ9 217 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 RAB17Q9H0T7 212 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 UBIAD1Q9Y5Z9 338 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 ALG6Q9Y672 507 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 TMEM150BA6NC51 233 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 MYO1FO00160 1098 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 MRPS9P82933 396 aaKnown RBP25.26■■□□□ 1.63
NDEL1-201ENST00000334527 SPP2Q13103 211 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 FKBP1CQ5VVH2 108 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 TRMT1LQ7Z2T5 733 aaKnown RBP25.26■■□□□ 1.63
NDEL1-201ENST00000334527 MCF2L2Q86YR7 1114 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 PLEKHO2Q8TD55 490 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 ERVK-5Q9HDB9 667 aa25.26■■□□□ 1.63
NDEL1-201ENST00000334527 ALAS1P13196 640 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 YWHABP31946 246 aaKnown RBP25.25■■□□□ 1.63
NDEL1-201ENST00000334527 HADHBP55084 474 aaKnown RBP25.25■■□□□ 1.63
NDEL1-201ENST00000334527 DHX9Q08211 1270 aaKnown RBP25.25■■□□□ 1.63
NDEL1-201ENST00000334527 PTGISQ16647 500 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 PCNX4Q63HM2 1172 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 ZNF746Q6NUN9 644 aaPredicted RBP25.25■■□□□ 1.63
NDEL1-201ENST00000334527 PRPF38AQ8NAV1 312 aaKnown RBP25.25■■□□□ 1.63
NDEL1-201ENST00000334527 ZNF277Q9NRM2 450 aaPredicted RBP25.25■■□□□ 1.63
NDEL1-201ENST00000334527 HOMER2Q9NSB8 354 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 SLC16A4O15374 487 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 PPP2R5EQ16537 467 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 TBC1D10BQ4KMP7 808 aaPredicted RBP25.25■■□□□ 1.63
NDEL1-201ENST00000334527 RUFY4Q6ZNE9 571 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 FAM83AQ86UY5 434 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 ATP8B4Q8TF62 1192 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 KAT5Q92993 513 aa25.25■■□□□ 1.63
NDEL1-201ENST00000334527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.25■■□□□ 1.631e-7■■■■■ 44.7
NDEL1-201ENST00000334527 TULP1O00294 542 aaPredicted RBP25.24■■□□□ 1.63
NDEL1-201ENST00000334527 MXI1P50539 228 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 GTF2BQ00403 316 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 UGCGQ16739 394 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 C11orf63Q6NUN7 778 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 GPRC5CQ9NQ84 441 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 BCCIPQ9P287 314 aaKnown RBP eCLIP25.24■■□□□ 1.63
NDEL1-201ENST00000334527 COL4A5P29400 1685 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 TMEM110-MUSTN1A8MSY1 372 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 VCAM1P19320 739 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 PEX3P56589 373 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 GPC5P78333 572 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 BIRC3Q13489 604 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 CLUL1Q15846 466 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 ARFGAP2Q8N6H7 521 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 TMEM117Q9H0C3 514 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 PFASO15067 1338 aa25.24■■□□□ 1.63
NDEL1-201ENST00000334527 A0A087WUV0 522 aaPredicted RBP25.23■■□□□ 1.63
NDEL1-201ENST00000334527 GOLGA8IPA6NC78 632 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 GOLGA8JA6NMD2 632 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 BACH1O14867 736 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 LYPLA2O95372 231 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 SGPL1O95470 568 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 EIF2AK2P19525 551 aaKnown RBP25.23■■□□□ 1.63
NDEL1-201ENST00000334527 AADACL2Q6P093 401 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 B4GALNT4Q76KP1 1039 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 FMO2Q99518 471 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 RAVER2Q9HCJ3 691 aaKnown RBP25.23■■□□□ 1.63
NDEL1-201ENST00000334527 UBL4BQ8N7F7 174 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 SYTL5Q8TDW5 730 aaPredicted RBP25.23■■□□□ 1.63
NDEL1-201ENST00000334527 GLG1Q92896 1179 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 ST6GALNAC4Q9H4F1 302 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 TBC1D22BQ9NU19 505 aa25.23■■□□□ 1.63
NDEL1-201ENST00000334527 ASTN2O75129 1339 aaPredicted RBP25.22■■□□□ 1.63
NDEL1-201ENST00000334527 MIF4GDA9UHW6 222 aaKnown RBP25.22■■□□□ 1.63
NDEL1-201ENST00000334527 RTN2O75298 545 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 DUPD1Q68J44 220 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 TADA2BQ86TJ2 420 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 RTKN2Q8IZC4 609 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 KRT35Q92764 455 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 ERP44Q9BS26 406 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 CHORDC1Q9UHD1 332 aaPredicted RBP25.22■■□□□ 1.63
NDEL1-201ENST00000334527 SYNGAP1Q96PV0 1343 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 MAPK13O15264 365 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 ADRB2P07550 413 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 SEC24CP53992 1094 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 TCEAL1Q15170 157 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 NOP9Q86U38 636 aaKnown RBP25.22■■□□□ 1.63
NDEL1-201ENST00000334527 EPS8L1Q8TE68 723 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 TAAR1Q96RJ0 339 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 PCDHB18PQ96TA0 734 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 PGAP2Q9UHJ9 254 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 ATP8A1Q9Y2Q0 1164 aa25.22■■□□□ 1.63
NDEL1-201ENST00000334527 MARCKSL1P49006 195 aa25.21■■□□□ 1.63
NDEL1-201ENST00000334527 MAP2K1Q02750 393 aaPredicted RBP25.21■■□□□ 1.63
NDEL1-201ENST00000334527 FAM102BQ5T8I3 360 aa25.21■■□□□ 1.63
NDEL1-201ENST00000334527 PPM1KQ8N3J5 372 aa25.21■■□□□ 1.63
NDEL1-201ENST00000334527 ZSWIM1Q9BR11 485 aa25.21■■□□□ 1.63
NDEL1-201ENST00000334527 SCAF8Q9UPN6 1271 aaKnown RBP25.21■■□□□ 1.63
NDEL1-201ENST00000334527 FAM187AA6NFU0 413 aa25.2■■□□□ 1.63
NDEL1-201ENST00000334527 WDR46O15213 610 aaKnown RBP25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms