RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 KLHL14Q9P2G3 628 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 RGS17Q9UGC6 210 aaPredicted RBP14.77□□□□□ -0.04
SYNE3-201ENST00000334258 CNOT7Q9UIV1 285 aaKnown RBP14.77□□□□□ -0.04
SYNE3-201ENST00000334258 ALG6Q9Y672 507 aa14.77□□□□□ -0.04
SYNE3-201ENST00000334258 TNRC6CQ9HCJ0 1690 aaKnown RBP14.77□□□□□ -0.05
SYNE3-201ENST00000334258 FAM196BA6NMK8 535 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 RIPK2O43353 540 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 HIP1RO75146 1068 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 UPP2O95045 317 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 LDHCP07864 332 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 CREB1P16220 341 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 KCNJ1P48048 391 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 NT5C2P49902 561 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 ARSHQ5FYA8 562 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 RIOX1Q9H6W3 641 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 ETNK1Q9HBU6 452 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 PICK1Q9NRD5 415 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 DNM3Q9UQ16 869 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 ARL2BPQ9Y2Y0 163 aa14.77□□□□□ -0.05
SYNE3-201ENST00000334258 SFI1A8K8P3 1242 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 FOXO6A8MYZ6 492 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 PODXLO00592 558 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 PHF2O75151 1096 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 TBCAO75347 108 aaKnown RBP14.76□□□□□ -0.05
SYNE3-201ENST00000334258 MED24O75448 989 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 CHRNA3P32297 505 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 STX2P32856 288 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 BTDP43251 543 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 MESDQ14696 234 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 ZNF772Q68DY9 489 aaPredicted RBP14.76□□□□□ -0.05
SYNE3-201ENST00000334258 KIAA0825Q8IV33 1275 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 WDR66Q8TBY9 1149 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 ZC3H12CQ9C0D7 883 aaKnown RBP14.76□□□□□ -0.05
SYNE3-201ENST00000334258 TAS2R14Q9NYV8 317 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 GRHL1Q9NZI5 618 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 PSMC6P62333 389 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 SEL1L2Q5TEA6 688 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 REEP2Q9BRK0 252 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 SIX2Q9NPC8 291 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 TRAF3IP3Q9Y228 551 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 ANKRD33BA6NCL7 494 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L15C9J2P7 530 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L13C9JLJ4 530 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L11C9JVI0 530 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L18D6R9N7 530 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L22D6RA61 530 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L17D6RBQ6 530 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L19D6RCP7 530 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L20D6RJB6 530 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 CYP4A11Q02928 519 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 KCNA1Q09470 495 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L24Q0WX57 530 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 TCP10Q12799 353 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 BNIP1Q12981 228 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 DPY19L2P1Q6NXN4 242 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 USP17L6PQ6QN14 398 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 FITM2Q8N6M3 262 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 PRELID2Q8N945 189 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 KRT35Q92764 455 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 RUNDC3BQ96NL0 473 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 SH3GL3Q99963 347 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 TBK1Q9UHD2 729 aa14.76□□□□□ -0.05
SYNE3-201ENST00000334258 THSD7AQ9UPZ6 1657 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 RSPH10B2B2RC85 870 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 hCG_1984214I3L0E3 225 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 RSPH10BP0C881 870 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 RARGP13631 454 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 PCK1P35558 622 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 MARCKSL1P49006 195 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 DRG2P55039 364 aaKnown RBP14.75□□□□□ -0.05
SYNE3-201ENST00000334258 GRIK3Q13003 919 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 VSIG1Q86XK7 387 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 ZNF713Q8N859 430 aaPredicted RBP14.75□□□□□ -0.05
SYNE3-201ENST00000334258 DDX23Q9BUQ8 820 aaKnown RBP14.75□□□□□ -0.05
SYNE3-201ENST00000334258 CCDC134Q9H6E4 229 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 PRDM16Q9HAZ2 1276 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 SLC5A4Q9NY91 659 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 MTUS1Q9ULD2 1270 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 PDXKO00764 312 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 SMARCA1P28370 1054 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 JAM2P57087 298 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 BTNL9Q6UXG8 535 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 DPP8Q6V1X1 898 aaPredicted RBP14.75□□□□□ -0.05
SYNE3-201ENST00000334258 FAM186BQ8IYM0 893 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 SLC17A8Q8NDX2 589 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 IKZF4Q9H2S9 585 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 SYNGAP1Q96PV0 1343 aa14.75□□□□□ -0.05
SYNE3-201ENST00000334258 BRAFP15056 766 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 ADRA2BP18089 450 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 GBP1P32455 592 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 PPATQ06203 517 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 GIT2Q14161 759 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 CLUL1Q15846 466 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 TTBK2Q6IQ55 1244 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 FAM47EQ6ZV65 393 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 FBF1Q8TES7 1133 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 TGS1Q96RS0 853 aaKnown RBP14.74□□□□□ -0.05
SYNE3-201ENST00000334258 ADAM22Q9P0K1 906 aa14.74□□□□□ -0.05
SYNE3-201ENST00000334258 PNMA6FA0A0J9YX94 578 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms