RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CEP95Q96GE4 821 aa19.51■□□□□ 0.71
PKP3-201ENST00000331563 UBE2OQ9C0C9 1292 aaKnown RBP19.51■□□□□ 0.71
PKP3-201ENST00000331563 DNAAF2Q9NVR5 837 aaKnown RBP19.51■□□□□ 0.71
PKP3-201ENST00000331563 GNAQP50148 359 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 NAPAP54920 295 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 KLRC3Q07444 240 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 U2AF1L4Q8WU68 220 aaKnown RBP19.5■□□□□ 0.71
PKP3-201ENST00000331563 RMDN2Q96LZ7 410 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 DDX23Q9BUQ8 820 aaKnown RBP19.5■□□□□ 0.71
PKP3-201ENST00000331563 PICK1Q9NRD5 415 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 USP40Q9NVE5 1235 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 MAD2L2Q9UI95 211 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 TMEM120BA0PK00 339 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 OAS1P00973 400 aaKnown RBP19.5■□□□□ 0.71
PKP3-201ENST00000331563 RNASELQ05823 741 aaKnown RBP19.5■□□□□ 0.71
PKP3-201ENST00000331563 ASRGL1Q7L266 308 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 IRF2BP2Q7Z5L9 587 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 VSIG1Q86XK7 387 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 JAMLQ86YT9 394 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 TMEM165Q9HC07 324 aa19.5■□□□□ 0.71
PKP3-201ENST00000331563 POU5F1Q01860 360 aaKnown RBP19.49■□□□□ 0.71
PKP3-201ENST00000331563 SHROOM1Q2M3G4 852 aaPredicted RBP19.49■□□□□ 0.71
PKP3-201ENST00000331563 LONP2Q86WA8 852 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 RNPEPL1Q9HAU8 725 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 DLGAP2Q9P1A6 1054 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 STK17AQ9UEE5 414 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 BZW2Q9Y6E2 419 aaKnown RBP19.49■□□□□ 0.71
PKP3-201ENST00000331563 SLC9A1P19634 815 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 KLC1Q07866 573 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 KCNH2Q12809 1159 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 TSNAXIP1Q2TAA8 658 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 INTS8Q75QN2 995 aaKnown RBP19.49■□□□□ 0.71
PKP3-201ENST00000331563 NEK8Q86SG6 692 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 FAM163AQ96GL9 167 aaPredicted RBP19.49■□□□□ 0.71
PKP3-201ENST00000331563 NUDCD1Q96RS6 583 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 RPS6KC1Q96S38 1066 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 UBA5Q9GZZ9 404 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 LRRC42Q9Y546 428 aa19.49■□□□□ 0.71
PKP3-201ENST00000331563 O00370 1275 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 CALB2P22676 271 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 AUHQ13825 339 aaKnown RBP19.48■□□□□ 0.71
PKP3-201ENST00000331563 LONRF1Q17RB8 773 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 EXOC3L1Q86VI1 746 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 DGKHQ86XP1 1220 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 TRIM59Q8IWR1 403 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 TRIM42Q8IWZ5 723 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 SNX29Q8TEQ0 813 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 MAIP1Q8WWC4 291 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 ARHGEF2Q92974 986 aaKnown RBP19.48■□□□□ 0.71
PKP3-201ENST00000331563 NAP1L3Q99457 506 aaPredicted RBP19.48■□□□□ 0.71
PKP3-201ENST00000331563 GANQ9H2C0 597 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 ERVK-5Q9HDB9 667 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 RPTORQ8N122 1335 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 LAMB1P07942 1786 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 H0YIN7 160 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 GNA14O95837 355 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 PLS1Q14651 629 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 MYBPC3Q14896 1274 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 MUM1Q2TAK8 710 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 GALNT17Q6IS24 598 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 C16orf86Q6ZW13 317 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 PIGOQ8TEQ8 1089 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 ZHX3Q9H4I2 956 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 OSGEPQ9NPF4 335 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 BARHL2Q9NY43 387 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 GAKO14976 1311 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 MAST2Q6P0Q8 1798 aa19.48■□□□□ 0.71
PKP3-201ENST00000331563 ZBTB48P10074 688 aaPredicted RBP19.47■□□□□ 0.71
PKP3-201ENST00000331563 ATP6V1C1P21283 382 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 ABCB4P21439 1286 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 AOC3Q16853 763 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 FAM26FQ5R3K3 315 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 KRT25Q7Z3Z0 450 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 SYCP3Q8IZU3 236 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 LRRC47Q8N1G4 583 aaKnown RBP19.47■□□□□ 0.71
PKP3-201ENST00000331563 HES6Q96HZ4 224 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 PPP1R12CQ9BZL4 782 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 POTEMA6NI47 508 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 KIAA0391O15091 583 aaKnown RBP19.47■□□□□ 0.71
PKP3-201ENST00000331563 UNC5CO95185 931 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 UCHL3P15374 230 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 TMEM266Q2M3C6 531 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 ZDHHC24Q6UX98 284 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 PNMA5Q96PV4 448 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 TGS1Q96RS0 853 aaKnown RBP19.47■□□□□ 0.71
PKP3-201ENST00000331563 TXLNGQ9NUQ3 528 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 CNOT7Q9UIV1 285 aaKnown RBP19.47■□□□□ 0.71
PKP3-201ENST00000331563 STXBP5LQ9Y2K9 1186 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 FRMPD2Q68DX3 1309 aaPredicted RBP19.47■□□□□ 0.71
PKP3-201ENST00000331563 CDK5RAP2Q96SN8 1893 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 FAM187AA6NFU0 413 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 GJB6O95452 261 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 CREB1P16220 341 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 STX2P32856 288 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 RFC5P40937 340 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 SESN3P58005 492 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 ADCY1Q08828 1119 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 COASYQ13057 564 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 SLC15A2Q16348 729 aa19.47■□□□□ 0.71
PKP3-201ENST00000331563 PPP2R5EQ16537 467 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms