RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 KANSL1LA0AUZ9 987 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 KRT36O76013 467 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 GRIA2P42262 883 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 TNNC1P63316 161 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 CYLC2Q14093 348 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-201ENST00000328923 CNGA2Q16280 664 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 HS2ST1Q7LGA3 356 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 ECHDC2Q86YB7 292 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 ZNF713Q8N859 430 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-201ENST00000328923 CEP70Q8NHQ1 597 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 FAM32AQ9Y421 112 aaKnown RBP12.7□□□□□ -0.38
SHMT2-201ENST00000328923 TNS1Q9HBL0 1735 aaKnown RBP12.7□□□□□ -0.38
SHMT2-201ENST00000328923 RIC1Q4ADV7 1423 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 ERVV-1B6SEH8 477 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 DAPK3O43293 454 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 TIMM44O43615 452 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 FTCDO95954 541 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 RPN1P04843 607 aaKnown RBP12.7□□□□□ -0.38
SHMT2-201ENST00000328923 CSF1RP07333 972 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 CTDSPL2Q05D32 466 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 TBL3Q12788 808 aaKnown RBP12.7□□□□□ -0.38
SHMT2-201ENST00000328923 KIF22Q14807 665 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 ADSSL1Q8N142 457 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 SYNE4Q8N205 404 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 DTX3LQ8TDB6 740 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 STAMQ92783 540 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 ZNF184Q99676 751 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-201ENST00000328923 CCDC28BQ9BUN5 200 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 PHF20Q9BVI0 1012 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 DRC3Q9H069 523 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 CCDC113Q9H0I3 377 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 LRP5O75197 1615 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 MYH3P11055 1940 aa12.7□□□□□ -0.38
SHMT2-201ENST00000328923 CAPN9O14815 690 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 STK10O94804 968 aaKnown RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 LCA5LO95447 670 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 LMNAP02545 664 aaKnown RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 SCG2P13521 617 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 HNRNPH3P31942 346 aaKnown RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 MCAMP43121 646 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 WTAPQ15007 396 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 NEPROQ6NW34 567 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 EIF1ADQ8N9N8 165 aaKnown RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 FNDC8Q8TC99 324 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 SH3TC2Q8TF17 1288 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 CASP10Q92851 521 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 MAML3Q96JK9 1138 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 INPP4AQ96PE3 977 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 KIAA1683Q9H0B3 1180 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 KRT82Q9NSB4 513 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 EXOC1Q9NV70 894 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 EURLQ9NYK6 297 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 DOCK2Q92608 1830 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 MAP3K7O43318 606 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 PRCPP42785 496 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 AP1B1Q10567 949 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 DCTN2Q13561 401 aaKnown RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 KRT72Q14CN4 511 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 TMC4Q7Z404 712 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 VSIG1Q86XK7 387 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 FANCBQ8NB91 859 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 CXorf38Q8TB03 319 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 TPK1Q9H3S4 243 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 ATAD3AQ9NVI7 634 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 TBCCD1Q9NVR7 557 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 PTTG2Q9NZH5 202 aa12.69□□□□□ -0.38
SHMT2-201ENST00000328923 MAGEC2Q9UBF1 373 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 FBXO9Q9UK97 447 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-201ENST00000328923 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 TBX10O75333 385 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 TCF7P36402 384 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-201ENST00000328923 TRAPPC10P48553 1259 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 SIK1P57059 783 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 INAQ16352 499 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 CGB2Q6NT52 195 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
SHMT2-201ENST00000328923 ZNF449Q6P9G9 518 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 ST13P4Q8IZP2 240 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-201ENST00000328923 SLC7A5P1Q8MH63 180 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 USP38Q8NB14 1042 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 SLC43A3Q8NBI5 491 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 SLC7A6OSQ96CW6 309 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-201ENST00000328923 UBAC1Q9BSL1 405 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 MLXIPLQ9NP71 852 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 RTL9Q8NET4 1388 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 A0A1W2PQ67 120 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 TCRBV5S4A2TA0A5A2 114 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 GRID2IPA4D2P6 1211 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 RGS16O15492 202 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-201ENST00000328923 PDE6AP16499 860 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 KCNA4P22459 653 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 VPS41P49754 854 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 KIF11P52732 1056 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 EIF3BP55884 814 aaKnown RBP12.68□□□□□ -0.38
SHMT2-201ENST00000328923 SLC34A1Q06495 639 aa12.68□□□□□ -0.38
SHMT2-201ENST00000328923 IFIT5Q13325 482 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms