RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SFI1A8K8P3 1242 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 GJB6O95452 261 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 CTNNA2P26232 953 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 SARNPP82979 210 aaKnown RBP19.23■□□□□ 0.67
PRKCB-202ENST00000321728 SYT2Q8N9I0 419 aaPredicted RBP19.23■□□□□ 0.67
PRKCB-202ENST00000321728 NAP1L4Q99733 375 aaKnown RBP19.23■□□□□ 0.67
PRKCB-202ENST00000321728 ARHGEF10LQ9HCE6 1279 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 USP40Q9NVE5 1235 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 CHORDC1Q9UHD1 332 aaPredicted RBP19.23■□□□□ 0.67
PRKCB-202ENST00000321728 CORO1CQ9ULV4 474 aaPredicted RBP19.23■□□□□ 0.67
PRKCB-202ENST00000321728 PCDHA3Q9Y5H8 950 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 DDX60LQ5H9U9 1706 aaKnown RBP19.23■□□□□ 0.67
PRKCB-202ENST00000321728 MIF4GDA9UHW6 222 aaKnown RBP19.23■□□□□ 0.67
PRKCB-202ENST00000321728 GH1P01241 217 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 PDE6BP35913 854 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 SLC10A5Q5PT55 438 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 VSTM1Q6UX27 236 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 ASRGL1Q7L266 308 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 MAEAQ7L5Y9 396 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 RHOT2Q8IXI1 618 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 ART4Q93070 314 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 TGS1Q96RS0 853 aaKnown RBP19.23■□□□□ 0.67
PRKCB-202ENST00000321728 ZSWIM1Q9BR11 485 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 YIPF3Q9GZM5 350 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 CDC42EP4Q9H3Q1 356 aaKnown RBP19.23■□□□□ 0.67
PRKCB-202ENST00000321728 KLHL14Q9P2G3 628 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 PASKQ96RG2 1323 aa19.23■□□□□ 0.67
PRKCB-202ENST00000321728 TCRBV7S2A1N4TA0A589 114 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 EME2A4GXA9 379 aaPredicted RBP19.22■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L10C9JJH3 530 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 LUC7L3O95232 432 aaKnown RBP19.22■□□□□ 0.67
PRKCB-202ENST00000321728 PSMC2P35998 433 aaKnown RBP19.22■□□□□ 0.67
PRKCB-202ENST00000321728 FMO5P49326 533 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 MESDQ14696 234 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 TRIM68Q6AZZ1 485 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 ERMNQ8TAM6 284 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 ETNK1Q9HBU6 452 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 CTNNAL1Q9UBT7 734 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 TM4SF1P30408 202 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 STX2P32856 288 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 CYP4A11Q02928 519 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 ZNF543Q08ER8 600 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 BLMHQ13867 455 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 SLFN12Q8IYM2 578 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 SYT11Q9BT88 431 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 BHMT2Q9H2M3 363 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 MTUS1Q9ULD2 1270 aa19.22■□□□□ 0.67
PRKCB-202ENST00000321728 COILP38432 576 aaPredicted RBP19.21■□□□□ 0.67
PRKCB-202ENST00000321728 ADCY1Q08828 1119 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 LLGL1Q15334 1064 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 PRR16Q569H4 304 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 TRMT10CQ7L0Y3 403 aaKnown RBP19.21■□□□□ 0.67
PRKCB-202ENST00000321728 CKAP2Q8WWK9 683 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 GPR88Q9GZN0 384 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 HIP1RO75146 1068 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 FTLP02792 175 aaPredicted RBP19.21■□□□□ 0.67
PRKCB-202ENST00000321728 BRAFP15056 766 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 COMTP21964 271 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 ATP5DP30049 168 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 NOVP48745 357 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 CTTNQ14247 550 aaKnown RBP19.21■□□□□ 0.67
PRKCB-202ENST00000321728 C11orf91Q3C1V1 193 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 DPP8Q6V1X1 898 aaPredicted RBP19.21■□□□□ 0.67
PRKCB-202ENST00000321728 KCTD1Q719H9 257 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 POP1Q99575 1024 aaKnown RBP19.21■□□□□ 0.67
PRKCB-202ENST00000321728 RUSC1Q9BVN2 902 aa19.21■□□□□ 0.67
PRKCB-202ENST00000321728 ZBTB5O15062 677 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 TGFB1I1O43294 461 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 TRIM49P0CI25 452 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 TRIM49CP0CI26 452 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 PYGMP11217 842 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 AKR1B1P15121 316 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 ABL2P42684 1182 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 RRP1BQ14684 758 aaKnown RBP19.2■□□□□ 0.66
PRKCB-202ENST00000321728 BMT2Q1RMZ1 405 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 CBWD6Q4V339 395 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 CBWD3Q5JTY5 395 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 CBWD5Q5RIA9 395 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 SLC20A1Q8WUM9 679 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 BORCS6Q96GS4 357 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 SERPINB12Q96P63 405 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 INTS2Q9H0H0 1204 aaKnown RBP19.2■□□□□ 0.66
PRKCB-202ENST00000321728 ATF5Q9Y2D1 282 aaPredicted RBP19.2■□□□□ 0.66
PRKCB-202ENST00000321728 EP400Q96L91 3159 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 MYO3BQ8WXR4 1341 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 IRS2Q9Y4H2 1338 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 SPATA31C1P0DKV0 1188 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 SNHG28P0DPA3 235 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 C11orf63Q6NUN7 778 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 CYFIP1Q7L576 1253 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 NAF1Q96HR8 494 aaKnown RBP19.2■□□□□ 0.66
PRKCB-202ENST00000321728 RAB3IPQ96QF0 476 aaPredicted RBP19.2■□□□□ 0.66
PRKCB-202ENST00000321728 AGPAT1Q99943 283 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 MOV10L1Q9BXT6 1211 aaKnown RBP19.2■□□□□ 0.66
PRKCB-202ENST00000321728 OSBPL1AQ9BXW6 950 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 DNAJC17Q9NVM6 304 aaKnown RBP19.2■□□□□ 0.66
PRKCB-202ENST00000321728 APEX2Q9UBZ4 518 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 PRKAG3Q9UGI9 489 aa19.2■□□□□ 0.66
PRKCB-202ENST00000321728 COL14A1Q05707 1796 aaKnown RBP19.2■□□□□ 0.66
PRKCB-202ENST00000321728 FOXN3O00409 490 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms