RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 USP17L6PQ6QN14 398 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 LIMS2Q7Z4I7 341 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 LINC01465Q8N7H1 131 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 ANKS4BQ8N8V4 417 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 OR6Y1Q8NGX8 325 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 IL31RAQ8NI17 732 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 MAML1Q92585 1016 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 ARMC5Q96C12 935 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 ATP6V1G3Q96LB4 118 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 CSRNP1Q96S65 589 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 KANSL2Q9H9L4 492 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 AGPAT3Q9NRZ7 376 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 RAD17O75943 681 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 GNA11P29992 359 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 ADCY7P51828 1080 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 ANGEL2Q5VTE6 544 aaKnown RBP8.54□□□□□ -1.04
CNOT4-201ENST00000315544 RGMBQ6NW40 437 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 KLHDC8BQ8IXV7 354 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 MICALL1Q8N3F8 863 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 STK33Q9BYT3 514 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 GLIS2Q9BZE0 524 aaPredicted RBP8.54□□□□□ -1.04
CNOT4-201ENST00000315544 NUCKS1Q9H1E3 243 aaKnown RBP8.54□□□□□ -1.04
CNOT4-201ENST00000315544 ABCF2Q9UG63 623 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 GUCA1BQ9UMX6 200 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 GOLGA8KD6RF30 607 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 GNA14O95837 355 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 NDUFB10O96000 172 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 CCNE2O96020 404 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 T-ENOLP0DO92 83 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 PROZP22891 400 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 MNX1P50219 401 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 GPC3P51654 580 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 TPRNQ4KMQ1 711 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 SPDYAQ5MJ70 313 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 DNTTIP2Q5QJE6 756 aaKnown RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 AADACL2Q6P093 401 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 C11orf84Q9BUA3 381 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 UNC45AQ9H3U1 944 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 GOLPH3Q9H4A6 298 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 EMILIN3Q9NT22 766 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 CNTN3Q9P232 1028 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 SERPINB13Q9UIV8 391 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 KDM3AQ9Y4C1 1321 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 SART1O43290 800 aaKnown RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 VNN1O95497 513 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 FDX1P10109 184 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 MDH1P40925 334 aaKnown RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 RPL34P49207 117 aaKnown RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 PRPF4BQ13523 1007 aaKnown RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 PPP2R5AQ15172 486 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 MAP3K21Q5TCX8 1036 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 KLHL10Q6JEL2 608 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 BSNDQ8WZ55 320 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 KRT35Q92764 455 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 CARD9Q9H257 536 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 PANK4Q9NVE7 773 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 MCM8Q9UJA3 840 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 PACSIN2Q9UNF0 486 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 AGAP1Q9UPQ3 857 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 BUB1BO60566 1050 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 DNAJC8O75937 253 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 PRKCGP05129 697 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 GNAZP19086 355 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 TPM4P67936 248 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 MON1BQ7L1V2 547 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 MYOCDQ8IZQ8 938 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 SH2D3CQ8N5H7 860 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 CPLX3Q8WVH0 158 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 CCDC102AQ96A19 550 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.53□□□□□ -1.042e-7■■■□□ 14.8
CNOT4-201ENST00000315544 SLITRK6Q9H5Y7 841 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 SAP30BPQ9UHR5 308 aaKnown RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 FARP1Q9Y4F1 1045 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-201ENST00000315544 UNC80Q8N2C7 3258 aa8.53□□□□□ -1.04
CNOT4-201ENST00000315544 GNRH1P01148 92 aa8.52□□□□□ -1.04
CNOT4-201ENST00000315544 ADCY2Q08462 1091 aa8.52□□□□□ -1.04
CNOT4-201ENST00000315544 TARBP2Q15633 366 aaKnown RBP8.52□□□□□ -1.04
CNOT4-201ENST00000315544 TAF7LQ5H9L4 462 aa8.52□□□□□ -1.04
CNOT4-201ENST00000315544 EHBP1Q8NDI1 1231 aa8.52□□□□□ -1.04
CNOT4-201ENST00000315544 WHAMMQ8TF30 809 aa8.52□□□□□ -1.04
CNOT4-201ENST00000315544 CNKSR2Q8WXI2 1034 aa8.52□□□□□ -1.04
CNOT4-201ENST00000315544 EIF2AK1Q9BQI3 630 aaKnown RBP8.52□□□□□ -1.04
CNOT4-201ENST00000315544 TRAFD1O14545 582 aaPredicted RBP8.52□□□□□ -1.05
CNOT4-201ENST00000315544 IL1BP01584 269 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 GHRP10912 638 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 CXCR5P32302 372 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 FMO5P49326 533 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 RIPK1Q13546 671 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 LETM2Q2VYF4 491 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 SLC30A10Q6XR72 485 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 SV2BQ7L1I2 683 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 HEATR3Q7Z4Q2 680 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 SLC7A14Q8TBB6 771 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 GBA2Q9HCG7 927 aaPredicted RBP8.52□□□□□ -1.05
CNOT4-201ENST00000315544 C6orf50Q9HD87 102 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 ODF2LQ9ULJ1 636 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 PLXNB3Q9ULL4 1909 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 ERICH2A1L162 156 aa8.52□□□□□ -1.05
CNOT4-201ENST00000315544 CXCL11O14625 94 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms