RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 SCLYQ96I15 445 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 GTPBP4Q9BZE4 634 aaKnown RBP13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 PRMT7Q9NVM4 692 aaPredicted RBP13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 PADI3Q9ULW8 664 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 TBX20Q9UMR3 447 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 GDAQ9Y2T3 454 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
CHMP2A-201ENST00000312547 TTLL13PA6NNM8 815 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 TSPAN1O60635 241 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 RPS6KA5O75582 802 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 PIGRP01833 764 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 PRKCBP05771 671 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 FGFR4P22455 802 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 SFPQP23246 707 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 CD52P31358 61 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 HOXD13P35453 343 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 KCNA1Q09470 495 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 PLEKHG4Q58EX7 1191 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 L1TD1Q5T7N2 865 aaKnown RBP13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 FAM43BQ6ZT52 329 aaPredicted RBP13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 PRIMPOLQ96LW4 560 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 TMX1Q9H3N1 280 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 PRKAG2Q9UGJ0 569 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 ST3GAL5Q9UNP4 418 aa13.91□□□□□ -0.18
CHMP2A-201ENST00000312547 UBE4BO95155 1302 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 CNTNAP2Q9UHC6 1331 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 BIN1O00499 593 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 GPR182O15218 404 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 B4GALT5O43286 388 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 PRPF6O94906 941 aaKnown RBP13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 CSF2RAP15509 400 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 HOXA11P31270 313 aaPredicted RBP13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 ISM2Q6H9L7 571 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 ZPBP2Q6X784 338 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 STXBP4Q6ZWJ1 553 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 CATSPER4Q7RTX7 472 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 SMYD4Q8IYR2 804 aaPredicted RBP13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 GUF1Q8N442 669 aaKnown RBP13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 TMEM199Q8N511 208 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 MRPL4Q9BYD3 311 aaKnown RBP13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 AGPAT5Q9NUQ2 364 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 ZMYND8Q9ULU4 1186 aaPredicted RBP13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 USP20Q9Y2K6 914 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 NR2E3Q9Y5X4 410 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 LAMA3Q16787 3333 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 SIP14410 1827 aa13.9□□□□□ -0.18
CHMP2A-201ENST00000312547 ZMYM2Q9UBW7 1377 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 ABLIM1O14639 778 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 ERLIN2O94905 339 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 SYN1P17600 705 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 ARF4P18085 180 aaPredicted RBP13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 AXLP30530 894 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 PRCPP42785 496 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 STRN3Q13033 797 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 PAK2Q13177 524 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 PRPF4BQ13523 1007 aaKnown RBP13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 DSC3Q14574 896 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 TCTN1Q2MV58 587 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 MYOCDQ8IZQ8 938 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 ADSSL1Q8N142 457 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 DBF4BQ8NFT6 615 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 APBB2Q92870 758 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 BADQ92934 168 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 ACCSQ96QU6 501 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 ACO2Q99798 780 aaKnown RBP13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 TARS2Q9BW92 718 aaKnown RBP13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 IFIH1Q9BYX4 1025 aaKnown RBP13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 IKZF4Q9H2S9 585 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 PTPRHQ9HD43 1115 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 CHST12Q9NRB3 414 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
CHMP2A-201ENST00000312547 A0A1B0GUA9 196 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 TGFB1I1O43294 461 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 PFKMP08237 780 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 PROZP22891 400 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 FXR1P51114 621 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 NLRP12P59046 1061 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 NFX1Q12986 1120 aaKnown RBP13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 ATF7IP2Q5U623 682 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 SLC39A4Q6P5W5 647 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 C16orf59Q7L2K0 433 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 LINC01599Q8WXQ3 324 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 SEPT8Q92599 483 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 CCDC51Q96ER9 411 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 FUCA2Q9BTY2 467 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 KCTD10Q9H3F6 313 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 PDZD7Q9H5P4 517 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 TMEM206Q9H813 350 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 IL23AQ9NPF7 189 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 EXOC7Q9UPT5 735 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 MAPK8IP1Q9UQF2 711 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 TNFSF13BQ9Y275 285 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 STYXL1Q9Y6J8 313 aa13.88□□□□□ -0.19
CHMP2A-201ENST00000312547 MGEA5O60502 916 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 TOM1L1O75674 476 aa13.87□□□□□ -0.19
CHMP2A-201ENST00000312547 KIF20AO95235 890 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms