RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 HOXC6P09630 235 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 SMPD1P17405 629 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 EFNA5P52803 228 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 GNG11P61952 73 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 DLG4P78352 724 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
CLCF1-201ENST00000312438 CAPSQ13938 189 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 ARHGAP29Q52LW3 1261 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 SLFN12LQ6IEE8 588 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 ZNF662Q6ZS27 426 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 USP37Q86T82 979 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 GPD1LQ8N335 351 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 ZSWIM2Q8NEG5 633 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 SPAG5Q96R06 1193 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 DEF6Q9H4E7 631 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 SIX2Q9NPC8 291 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 ZHX1Q9UKY1 873 aaPredicted RBP18.21■□□□□ 0.51
CLCF1-201ENST00000312438 REXO2Q9Y3B8 237 aaKnown RBP18.21■□□□□ 0.51
CLCF1-201ENST00000312438 DAAM1Q9Y4D1 1078 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 PLEKP08567 350 aaPredicted RBP18.21■□□□□ 0.51
CLCF1-201ENST00000312438 EIF4A3P38919 411 aaKnown RBP18.21■□□□□ 0.51
CLCF1-201ENST00000312438 MYL7Q01449 175 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 ENPEPQ07075 957 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 MKRN4PQ13434 485 aaPredicted RBP18.21■□□□□ 0.51
CLCF1-201ENST00000312438 DRP2Q13474 957 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 HSP90AA2PQ14568 343 aaPredicted RBP18.21■□□□□ 0.51
CLCF1-201ENST00000312438 SPA17Q15506 151 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 HGSNATQ68CP4 663 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 CBWD2Q8IUF1 395 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 EHBP1Q8NDI1 1231 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 TMC2Q8TDI7 906 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 SAAL1Q96ER3 474 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 MFSD14AQ96MC6 490 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 HAUS4Q9H6D7 363 aa18.21■□□□□ 0.51
CLCF1-201ENST00000312438 GPBP1L1Q9HC44 474 aaPredicted RBP18.21■□□□□ 0.51
CLCF1-201ENST00000312438 ABT1Q9ULW3 272 aaKnown RBP18.21■□□□□ 0.51
CLCF1-201ENST00000312438 ZNFX1Q9P2E3 1918 aaKnown RBP18.2■□□□□ 0.5
CLCF1-201ENST00000312438 MYH11P35749 1972 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 AKR1B10O60218 316 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 KIF5CO60282 957 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 TM4SF4P48230 202 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 LAMTOR4Q0VGL1 99 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 RAPGEF1Q13905 1077 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 SMC1BQ8NDV3 1235 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 MYRIPQ8NFW9 859 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 PARD3BQ8TEW8 1205 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 HHIPL1Q96JK4 782 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 FHOD1Q9Y613 1164 aa18.2■□□□□ 0.5
CLCF1-201ENST00000312438 RIOK3O14730 519 aaKnown RBP18.19■□□□□ 0.5
CLCF1-201ENST00000312438 ASAP2O43150 1006 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 LCA5LO95447 670 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 PPP3CAQ08209 521 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 ASTE1Q2TB18 679 aaPredicted RBP18.19■□□□□ 0.5
CLCF1-201ENST00000312438 C1orf220Q5T0J3 134 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 EFCAB12Q6NXP0 572 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 USP6NLQ92738 828 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 C16orf70Q9BSU1 422 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 SUCLA2Q9P2R7 463 aaPredicted RBP18.19■□□□□ 0.5
CLCF1-201ENST00000312438 BZW2Q9Y6E2 419 aaKnown RBP18.19■□□□□ 0.5
CLCF1-201ENST00000312438 A0A0U1RQJ8 604 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 ZNF233A6NK53 670 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 MAGEB2O15479 319 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 EXTL3O43909 919 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 LDHAP00338 332 aaKnown RBP18.19■□□□□ 0.5
CLCF1-201ENST00000312438 ADRB2P07550 413 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 INSRRP14616 1297 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 CASQ1P31415 396 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 ARHGAP25P42331 645 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 KIF11P52732 1056 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 TNFAIP2Q03169 654 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 ASIC2Q16515 512 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 LRRC71Q8N4P6 559 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 OR6J1Q8NGC5 347 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 PLEKHO2Q8TD55 490 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 ATRIPQ8WXE1 791 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 INTS2Q9H0H0 1204 aaKnown RBP18.19■□□□□ 0.5
CLCF1-201ENST00000312438 C2orf40Q9H1Z8 148 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 MYO1AQ9UBC5 1043 aa18.19■□□□□ 0.5
CLCF1-201ENST00000312438 ZNF215Q9UL58 517 aaPredicted RBP18.19■□□□□ 0.5
CLCF1-201ENST00000312438 H3BRB1 525 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 SRGAP2CP0DJJ0 459 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 HOXD8P13378 290 aaPredicted RBP18.18■□□□□ 0.5
CLCF1-201ENST00000312438 GTF2H1P32780 548 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 GCLMP48507 274 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 KLHL30Q0D2K2 578 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 TFDP1Q14186 410 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 DGKDQ16760 1214 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 TDRD12Q587J7 1177 aaKnown RBP18.18■□□□□ 0.5
CLCF1-201ENST00000312438 CDCA2Q69YH5 1023 aaPredicted RBP18.18■□□□□ 0.5
CLCF1-201ENST00000312438 IQCEQ6IPM2 695 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 ZPBP2Q6X784 338 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 IRF2BP2Q7Z5L9 587 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 KIAA1328Q86T90 577 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 ZBTB8OSQ8IWT0 167 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 RNF149Q8NC42 400 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 LMO3Q8TAP4 145 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 TRAPPC12Q8WVT3 735 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 CCDC127Q96BQ5 260 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 FAM213AQ9BRX8 229 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 TARS2Q9BW92 718 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms