RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 EDRF1Q3B7T1 1238 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 CERS5Q8N5B7 392 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 ANAPC7Q9UJX3 599 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 A0A1B0GUA9 196 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 PI4K2BG5E9Z4 385 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 CTNNA2P26232 953 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 RPA1P27694 616 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 SOX10P56693 466 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 PPP4R3CPQ6ZMV5 832 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 MIER3Q7Z3K6 550 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 SYT2Q8N9I0 419 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 ACTRT1Q8TDG2 376 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 SYN2Q92777 582 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 ACSF2Q96CM8 615 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 SGSM3Q96HU1 749 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 RSRC1Q96IZ7 334 aaKnown RBP14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 SLITRK6Q9H5Y7 841 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 LRP6O75581 1613 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 PPEF1O14829 653 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 HIP1RO75146 1068 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 PYGMP11217 842 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 CRKP46108 304 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 MXI1P50539 228 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 ACCSLQ4AC99 568 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 LXNQ9BS40 222 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 ACTR5Q9H9F9 607 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 VPS37BQ9H9H4 285 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 ASTN1O14525 1302 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 DIAPH2O60879 1101 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 UBOX5O94941 541 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 ECEL1O95672 775 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 SPATA31C1P0DKV0 1188 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 BRAFP15056 766 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 FNTAP49354 379 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 TAOK1Q7L7X3 1001 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 RUBCNQ92622 972 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 AGPAT1Q99943 283 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 TOPORSQ9NS56 1045 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 APEX2Q9UBZ4 518 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 TRPC5Q9UL62 973 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 UBR2Q8IWV8 1755 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 TMEM120BA0PK00 339 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 TESPA1A2RU30 521 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 ALAS1P13196 640 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 ZNF394Q53GI3 561 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 C10orf76Q5T2E6 689 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 INTS8Q75QN2 995 aaKnown RBP14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 ARHGEF19Q8IW93 802 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 P2RX7Q99572 595 aaKnown RBP14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 HOMER3Q9NSC5 361 aa14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 SUCLA2Q9P2R7 463 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF21-201ENST00000296861 CCT8L1PA6NM43 557 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 ANKRD63C9JTQ0 380 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 DYNLT1P63172 113 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 KCNJ2P63252 427 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 EAPPQ56P03 285 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 PHLDB3Q6NSJ2 640 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 RNF207Q6ZRF8 634 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 RFX8Q6ZV50 586 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 LRRC57Q8N9N7 239 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 ZNF564Q8TBZ8 553 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 CPA5Q8WXQ8 436 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 COG5Q9UP83 839 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 PHLPP1O60346 1717 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 A8MUI8 341 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 MEIS2O14770 477 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 ARP10275 920 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 EIF2AK2P19525 551 aaKnown RBP14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 MAPK4P31152 587 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 MAPK7Q13164 816 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 SLC47A2Q86VL8 602 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 ACER1Q8TDN7 264 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 STK33Q9BYT3 514 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 TRIM7Q9C029 511 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 ECT2Q9H8V3 914 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 NOD2Q9HC29 1040 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 AGPAT3Q9NRZ7 376 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 ABCA3Q99758 1704 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 TGFB1I1O43294 461 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 HOXD13P35453 343 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 NPEPPSP55786 919 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 KRT17Q04695 432 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 TMEM132AQ24JP5 1023 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 XKR9Q5GH70 373 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 PABPC3Q9H361 631 aaKnown RBP14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 TMOD2Q9NZR1 351 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 COL4A1P02462 1669 aa14.29□□□□□ -0.12
TNFRSF21-201ENST00000296861 SHANK3Q9BYB0 1731 aa14.28□□□□□ -0.12
TNFRSF21-201ENST00000296861 GJB6O95452 261 aa14.28□□□□□ -0.12
TNFRSF21-201ENST00000296861 POLR2MP0CAP2 368 aa14.28□□□□□ -0.12
TNFRSF21-201ENST00000296861 TNNI1P19237 187 aa14.28□□□□□ -0.12
TNFRSF21-201ENST00000296861 ZNF131P52739 623 aa14.28□□□□□ -0.12
TNFRSF21-201ENST00000296861 GPC5P78333 572 aa14.28□□□□□ -0.12
TNFRSF21-201ENST00000296861 SMAD1Q15797 465 aaKnown RBP14.28□□□□□ -0.12
TNFRSF21-201ENST00000296861 LRIG3Q6UXM1 1119 aa14.28□□□□□ -0.12
TNFRSF21-201ENST00000296861 PPP1R12CQ9BZL4 782 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms