RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 USP8P40818 1118 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 SNRPFP62306 86 aaKnown RBP15.18■□□□□ 0.02
NXF1-201ENST00000294172 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
NXF1-201ENST00000294172 MTERF2Q49AM1 385 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 SH3D19Q5HYK7 790 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 CCNI2Q6ZMN8 369 aaPredicted RBP15.18■□□□□ 0.02
NXF1-201ENST00000294172 POP1Q99575 1024 aaKnown RBP15.18■□□□□ 0.02
NXF1-201ENST00000294172 TMEM117Q9H0C3 514 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 DMGDHQ9UI17 866 aaKnown RBP15.18■□□□□ 0.02
NXF1-201ENST00000294172 CSADQ9Y600 493 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 PFASO15067 1338 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 DGAT1O75907 488 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 MYBL2P10244 700 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 GPS2Q13227 327 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 GADL1Q6ZQY3 521 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 SULF1Q8IWU6 871 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 CHST13Q8NET6 341 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 TPCN2Q8NHX9 752 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 POMGNT1Q8WZA1 660 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 DCPSQ96C86 337 aaKnown RBP15.17■□□□□ 0.02
NXF1-201ENST00000294172 RNF14Q9UBS8 474 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 ADGRA3Q8IWK6 1321 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 DOCK5Q9H7D0 1870 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 H3BQF6 201 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 HNRNPDLO14979 420 aaKnown RBP15.17■□□□□ 0.02
NXF1-201ENST00000294172 P4HA2O15460 535 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 RFX1P22670 979 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 EPC2Q52LR7 807 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 FMNL3Q8IVF7 1028 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 LRRC57Q8N9N7 239 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 MCPH1Q8NEM0 835 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 SPIRE2Q8WWL2 714 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 KAT5Q92993 513 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 BICD1Q96G01 975 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 NTPCRQ9BSD7 190 aaKnown RBP15.17■□□□□ 0.02
NXF1-201ENST00000294172 ATP6V0A4Q9HBG4 840 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 XPNPEP1Q9NQW7 623 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 BTBD7Q9P203 1132 aa15.17■□□□□ 0.02
NXF1-201ENST00000294172 A0A0U1RQG5 324 aaPredicted RBP15.16■□□□□ 0.02
NXF1-201ENST00000294172 SUPT20HL2P0C7V6 817 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 C8orf74Q6P047 294 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 DAAM2Q86T65 1068 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 NCAPG2Q86XI2 1143 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 PALB2Q86YC2 1186 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
NXF1-201ENST00000294172 IFT74Q96LB3 600 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 POLR3FQ9H1D9 316 aaPredicted RBP15.16■□□□□ 0.02
NXF1-201ENST00000294172 PLEKHA4Q9H4M7 779 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 C17orf75Q9HAS0 396 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 OSGEPQ9NPF4 335 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 TAS2R14Q9NYV8 317 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 INTUQ9ULD6 942 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 MAPK13O15264 365 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 KIF4AO95239 1232 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 XKR3Q5GH77 459 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 SLC39A4Q6P5W5 647 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 PEX26Q7Z412 305 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 DNERQ8NFT8 737 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 SLC20A1Q8WUM9 679 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 LMBR1Q8WVP7 490 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 CTNNBL1Q8WYA6 563 aaPredicted RBP15.16■□□□□ 0.02
NXF1-201ENST00000294172 CCDC102AQ96A19 550 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 HVCN1Q96D96 273 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 OTUD5Q96G74 571 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 AGPAT1Q99943 283 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 SYT11Q9BT88 431 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 PAGR1Q9BTK6 254 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 ELP3Q9H9T3 547 aa15.16■□□□□ 0.02
NXF1-201ENST00000294172 ADARB2Q9NS39 739 aaKnown RBP15.16■□□□□ 0.02
NXF1-201ENST00000294172 DLATP10515 647 aaKnown RBP15.15■□□□□ 0.02
NXF1-201ENST00000294172 POLGP54098 1239 aaPredicted RBP15.15■□□□□ 0.02
NXF1-201ENST00000294172 KIF22Q14807 665 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 PPM1KQ8N3J5 372 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 SLC35G2Q8TBE7 412 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 TMEM143Q96AN5 459 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 ZNF302Q9NR11 478 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 PDLIM7Q9NR12 457 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 TOPORSQ9NS56 1045 aaPredicted RBP15.15■□□□□ 0.02
NXF1-201ENST00000294172 USP20Q9Y2K6 914 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 DAAM1Q9Y4D1 1078 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 A0A0A6YYK5 440 aaPredicted RBP15.15■□□□□ 0.02
NXF1-201ENST00000294172 IRF6O14896 467 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 CEP104O60308 925 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 ALDH5A1P51649 535 aaPredicted RBP15.15■□□□□ 0.02
NXF1-201ENST00000294172 GYS2P54840 703 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 PARD3BQ8TEW8 1205 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 SEMA4DQ92854 862 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 ELMO3Q96BJ8 720 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 RNF181Q9P0P0 153 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 STIM2Q9P246 746 aa15.15■□□□□ 0.02
NXF1-201ENST00000294172 TMEM253P0C7T8 217 aa15.14■□□□□ 0.01
NXF1-201ENST00000294172 ATP4AP20648 1035 aa15.14■□□□□ 0.01
NXF1-201ENST00000294172 IRX3P78415 501 aaPredicted RBP15.14■□□□□ 0.01
NXF1-201ENST00000294172 EMC2Q15006 297 aa15.14■□□□□ 0.01
NXF1-201ENST00000294172 KRT39Q6A163 491 aa15.14■□□□□ 0.01
NXF1-201ENST00000294172 EEPD1Q7L9B9 569 aa15.14■□□□□ 0.01
NXF1-201ENST00000294172 KRT12Q99456 494 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms