RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 VWA3AA6NCI4 1184 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 TK2O00142 265 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 RFXAPO00287 272 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 BRD1O95696 1058 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 BMP15O95972 392 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 EDN1P05305 212 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 CCT6AP40227 531 aaKnown RBP10.18□□□□□ -0.78
HMGN1-201ENST00000288344 POLGP54098 1239 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-201ENST00000288344 MBTD1Q05BQ5 628 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 CAMK1Q14012 370 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 MXD4Q14582 209 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-201ENST00000288344 NAALADL2Q58DX5 795 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 FAM102BQ5T8I3 360 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 CDCA2Q69YH5 1023 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-201ENST00000288344 RINT1Q6NUQ1 792 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 MRPL10Q7Z7H8 261 aaKnown RBP10.18□□□□□ -0.78
HMGN1-201ENST00000288344 ECHDC2Q86YB7 292 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 LINC00301Q8NCQ3 95 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 ERMNQ8TAM6 284 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 TCP11Q8WWU5 503 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 MYLIPQ8WY64 445 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 CASD1Q96PB1 797 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 CCDC113Q9H0I3 377 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 BHMT2Q9H2M3 363 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 PRDM12Q9H4Q4 367 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 C1orf112Q9NSG2 853 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 DDX19AQ9NUU7 478 aaKnown RBP10.18□□□□□ -0.78
HMGN1-201ENST00000288344 ADGRA3Q8IWK6 1321 aa10.18□□□□□ -0.78
HMGN1-201ENST00000288344 MYH15Q9Y2K3 1946 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 VPS37CA5D8V6 355 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-201ENST00000288344 EOMESO95936 686 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 SRGAP2CP0DJJ0 459 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 ZSCAN22P10073 491 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-201ENST00000288344 GUCY2CP25092 1073 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 LONP1P36776 959 aaKnown RBP10.17□□□□□ -0.78
HMGN1-201ENST00000288344 GATMP50440 423 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 FAM187BQ17R55 369 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 ODR4Q5SWX8 454 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 AXDND1Q5T1B0 1012 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-201ENST00000288344 KRT79Q5XKE5 535 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 HAUS3Q68CZ6 603 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 FAM117BQ6P1L5 589 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 RNF149Q8NC42 400 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 SNX29Q8TEQ0 813 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 EPSTI1Q96J88 318 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 C17orf80Q9BSJ5 609 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 RUSC1Q9BVN2 902 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 INO80BQ9C086 356 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-201ENST00000288344 CWH43Q9H720 699 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 ATP6V0A4Q9HBG4 840 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 POLD4Q9HCU8 107 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 AGPAT5Q9NUQ2 364 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 TMEM161AQ9NX61 479 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 MTCH2Q9Y6C9 303 aa10.17□□□□□ -0.78
HMGN1-201ENST00000288344 NLRC5Q86WI3 1866 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 A0A087X0B3 334 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 A0A1B0GUA9 196 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 INPPL1O15357 1258 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 TSPAN1O60635 241 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 UPP2O95045 317 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 F13A1P00488 732 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 PHKA2P46019 1235 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 PCBP1Q15365 356 aaKnown RBP eCLIP10.16□□□□□ -0.78
HMGN1-201ENST00000288344 EPC2Q52LR7 807 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 CLLU1OSQ5K130 101 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 PPP2R2DQ66LE6 453 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 NUDT18Q6ZVK8 323 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 TAS1R3Q7RTX0 852 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 HSCBQ8IWL3 235 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 CMTR2Q8IYT2 770 aaKnown RBP10.16□□□□□ -0.78
HMGN1-201ENST00000288344 SMG8Q8ND04 991 aaKnown RBP10.16□□□□□ -0.78
HMGN1-201ENST00000288344 MCPH1Q8NEM0 835 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 NLRP4Q96MN2 994 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 CLIC6Q96NY7 704 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 TGS1Q96RS0 853 aaKnown RBP10.16□□□□□ -0.78
HMGN1-201ENST00000288344 FIZ1Q96SL8 496 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 RAB34Q9BZG1 259 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 CSRNP2Q9H175 543 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 RCOR1Q9UKL0 485 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 DNM3Q9UQ16 869 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 RALGAPA2Q2PPJ7 1873 aa10.16□□□□□ -0.78
HMGN1-201ENST00000288344 ATG2AQ2TAZ0 1938 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 H3BNC9 293 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 ABLIM1O14639 778 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
HMGN1-201ENST00000288344 PPP6R2O75170 966 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 ARF4P18085 180 aaPredicted RBP10.15□□□□□ -0.78
HMGN1-201ENST00000288344 MARCKSP29966 332 aaPredicted RBP10.15□□□□□ -0.78
HMGN1-201ENST00000288344 BMPR1AP36894 532 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 AFF1P51825 1210 aaKnown RBP10.15□□□□□ -0.78
HMGN1-201ENST00000288344 ZNF131P52739 623 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 COL19A1Q14993 1142 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 AGMOQ6ZNB7 445 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 CABP7Q86V35 215 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 TMEM192Q8IY95 271 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 GSTCDQ8NEC7 633 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 TATDN2Q93075 761 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 ZBED2Q9BTP6 218 aa10.15□□□□□ -0.78
HMGN1-201ENST00000288344 POLR3FQ9H1D9 316 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms