RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 UBE4BO95155 1302 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 ANKRD63C9JTQ0 380 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 ACKR2O00590 384 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 PSMA7O14818 248 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 TLR3O15455 904 aaKnown RBP23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 CAND2O75155 1236 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 PRKCBP05771 671 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 CCNE1P24864 410 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 ERCC5P28715 1186 aaPredicted RBP23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 ZNF165P49910 485 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 PAK1Q13153 545 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 STIM1Q13586 685 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 P2RX5Q93086 422 aa23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 NOC2LQ9Y3T9 749 aaKnown RBP23.94■■□□□ 1.42
PDLIM3-203ENST00000284771 ALPK3Q96L96 1907 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 M0QZ92 97 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 SCP2P22307 547 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 GPNMBQ14956 572 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 FAM187BQ17R55 369 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 TTI2Q6NXR4 508 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 NOC4LQ9BVI4 516 aaKnown RBP23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 TARS2Q9BW92 718 aaKnown RBP23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 TMEM206Q9H813 350 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 AGO3Q9H9G7 860 aaKnown RBP23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 DACH1Q9UI36 760 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 RWDD2AQ9UIY3 292 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 TBX21Q9UL17 535 aa23.93■■□□□ 1.42
PDLIM3-203ENST00000284771 KIF20AO95235 890 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 ADSSP30520 456 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 PPP1R2P41236 205 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 STRN3Q13033 797 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 CT47A1Q5JQC4 288 aaPredicted RBP23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 PPP4R3CPQ6ZMV5 832 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 DUSP9Q99956 384 aaKnown RBP23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 GBP3Q9H0R5 595 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 TRAF3IP3Q9Y228 551 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 PDXKO00764 312 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 HOXA11P31270 313 aaPredicted RBP23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 ABCD1P33897 745 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 IQCB1Q15051 598 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 FBXO47Q5MNV8 452 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 FAM228AQ86W67 206 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 DHX40Q8IX18 779 aaKnown RBP23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 SYCP3Q8IZU3 236 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 EEF2KMTQ96G04 330 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 ZBTB45Q96K62 511 aaPredicted RBP23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 HAPLN2Q9GZV7 340 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 CBX8Q9HC52 389 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 TYW1Q9NV66 732 aaKnown RBP23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 PRMT7Q9NVM4 692 aaPredicted RBP23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 PCDH10Q9P2E7 1040 aa23.92■■□□□ 1.42
PDLIM3-203ENST00000284771 CCDC85CA6NKD9 419 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 PITPNM1O00562 1244 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 CLIC2O15247 247 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 TSPAN1O60635 241 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 PIGRP01833 764 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 CLTBP09497 229 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 BFSP2Q13515 415 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 LPIN1Q14693 890 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 NCAPHQ15003 741 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 CDR2LQ86X02 465 aaPredicted RBP23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 ACO2Q99798 780 aaKnown RBP23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 BPIFA3Q9BQP9 254 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 HIPK3Q9H422 1215 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 AGPAT3Q9NRZ7 376 aa23.91■■□□□ 1.42
PDLIM3-203ENST00000284771 HNRNPDLO14979 420 aaKnown RBP23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 GHRP10912 638 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 SELPP16109 830 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 ARF4P18085 180 aaPredicted RBP23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 ITGB8P26012 769 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 PRPF4BQ13523 1007 aaKnown RBP23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 LRRC8DQ7L1W4 858 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 CPB2Q96IY4 423 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 PRIMPOLQ96LW4 560 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 MRPL4Q9BYD3 311 aaKnown RBP23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 PPP1R12CQ9BZL4 782 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 NAT10Q9H0A0 1025 aaKnown RBP23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 WNT8AQ9H1J5 351 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 PTPRHQ9HD43 1115 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 TMEM39AQ9NV64 488 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 EXOC7Q9UPT5 735 aa23.9■■□□□ 1.42
PDLIM3-203ENST00000284771 TRIM43BA6NCK2 446 aa23.89■■□□□ 1.42
PDLIM3-203ENST00000284771 ABLIM1O14639 778 aa23.89■■□□□ 1.42
PDLIM3-203ENST00000284771 CATSPER4Q7RTX7 472 aa23.89■■□□□ 1.42
PDLIM3-203ENST00000284771 LUZP1Q86V48 1076 aa23.89■■□□□ 1.42
PDLIM3-203ENST00000284771 ENOX1Q8TC92 643 aaKnown RBP23.89■■□□□ 1.42
PDLIM3-203ENST00000284771 TRIM43Q96BQ3 446 aaPredicted RBP23.89■■□□□ 1.42
PDLIM3-203ENST00000284771 CBWD1Q9BRT8 395 aa23.89■■□□□ 1.42
PDLIM3-203ENST00000284771 STYXL1Q9Y6J8 313 aa23.89■■□□□ 1.42
PDLIM3-203ENST00000284771 RPS6KA5O75582 802 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 CYP2C18P33260 490 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 LRRC63Q05C16 580 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 ZPBP2Q6X784 338 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 TSHZ1Q6ZSZ6 1077 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 TNS4Q8IZW8 715 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 AOPEPQ8N6M6 819 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 RNF214Q8ND24 703 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 ZSWIM2Q8NEG5 633 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 TET1Q8NFU7 2136 aa23.89■■□□□ 1.41
PDLIM3-203ENST00000284771 FAM200AQ8TCP9 573 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms