RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 SLC35G2Q8TBE7 412 aa15.4■□□□□ 0.06
TMEM47-201ENST00000275954 OPTNQ96CV9 577 aa15.4■□□□□ 0.06
TMEM47-201ENST00000275954 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.4■□□□□ 0.06
TMEM47-201ENST00000275954 CALN1Q9BXU9 219 aa15.4■□□□□ 0.06
TMEM47-201ENST00000275954 PLCB1Q9NQ66 1216 aa15.4■□□□□ 0.06
TMEM47-201ENST00000275954 HSPBP1Q9NZL4 362 aa15.4■□□□□ 0.06
TMEM47-201ENST00000275954 SGK1O00141 431 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 CLDN3O15551 220 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 TTI1O43156 1089 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 RNF8O76064 485 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 HTRA3P83110 453 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 CLUL1Q15846 466 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 KRT39Q6A163 491 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 ANKRD13AQ8IZ07 590 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 GPC2Q8N158 579 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 NEK9Q8TD19 979 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 FAM163AQ96GL9 167 aaPredicted RBP15.39■□□□□ 0.05
TMEM47-201ENST00000275954 RNPC3Q96LT9 517 aaKnown RBP15.39■□□□□ 0.05
TMEM47-201ENST00000275954 PI4K2AQ9BTU6 479 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 NUP85Q9BW27 656 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 CELF4Q9BZC1 486 aaKnown RBP15.39■□□□□ 0.05
TMEM47-201ENST00000275954 NFIBO00712 420 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 NR3C2P08235 984 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 MCPH1Q8NEM0 835 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 RFFLQ8WZ73 363 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 TNFRSF25Q93038 417 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 MTMR8Q96EF0 704 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 TRIM51Q9BSJ1 452 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 PNMA2Q9UL42 364 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 COL14A1Q05707 1796 aaKnown RBP15.39■□□□□ 0.05
TMEM47-201ENST00000275954 TMEM150BA6NC51 233 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 IRF6O14896 467 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 C2CD6Q53TS8 623 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 DNAJC24Q6P3W2 148 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 TRAPPC11Q7Z392 1133 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 PALM2Q8IXS6 379 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 ZNF564Q8TBZ8 553 aaPredicted RBP15.39■□□□□ 0.05
TMEM47-201ENST00000275954 C1orf54Q8WWF1 131 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 APEX2Q9UBZ4 518 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 TTC7AQ9ULT0 858 aaPredicted RBP15.39■□□□□ 0.05
TMEM47-201ENST00000275954 PITPNM2Q9BZ72 1349 aa15.39■□□□□ 0.05
TMEM47-201ENST00000275954 LRRC10BA6NIK2 292 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 HOXA7P31268 230 aaPredicted RBP15.38■□□□□ 0.05
TMEM47-201ENST00000275954 ARHGAP25P42331 645 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 STXBP2Q15833 593 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 FAM208AQ9UK61 1670 aaKnown RBP15.38■□□□□ 0.05
TMEM47-201ENST00000275954 MXRA8Q9BRK3 442 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 ADPGKQ9BRR6 497 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 POLR3FQ9H1D9 316 aaPredicted RBP15.38■□□□□ 0.05
TMEM47-201ENST00000275954 HSD3B7Q9H2F3 369 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 UNC45AQ9H3U1 944 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 ATP6V0A4Q9HBG4 840 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 ANAPC5Q9UJX4 755 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 NAGPAQ9UK23 515 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 FBXL5Q9UKA1 691 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 STK38LQ9Y2H1 464 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 FAM169AQ9Y6X4 670 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 EML1O00423 815 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.38■□□□□ 0.05
TMEM47-201ENST00000275954 AGPAT1Q99943 283 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 A0A1W2PQJ5 194 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 RAD51CO43502 376 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 KRT1P04264 644 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 PON1P27169 355 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 MAGOHP61326 146 aaKnown RBP15.38■□□□□ 0.05
TMEM47-201ENST00000275954 GUCY1A3Q02108 690 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 ALCAMQ13740 583 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 GLE1Q53GS7 698 aaKnown RBP15.38■□□□□ 0.05
TMEM47-201ENST00000275954 HAS1Q92839 578 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 RNF34Q969K3 372 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 CBWD1Q9BRT8 395 aa15.38■□□□□ 0.05
TMEM47-201ENST00000275954 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
TMEM47-201ENST00000275954 ZSCAN5CA6NGD5 496 aaPredicted RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 LRRIQ3A6PVS8 624 aaPredicted RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 HADHQ16836 314 aaKnown RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 IRF2BP1Q8IU81 584 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 FBXL13Q8NEE6 735 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 HDAC7Q8WUI4 952 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 THOC1Q96FV9 657 aaKnown RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 FAM118BQ9BPY3 351 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 STK33Q9BYT3 514 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 ADAM33Q9BZ11 813 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 ANKZF1Q9H8Y5 726 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 AGPAT3Q9NRZ7 376 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 ZNF446Q9NWS9 450 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 L1RE1Q9UN81 338 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 LTBP4Q8N2S1 1624 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 RASGRF2O14827 1237 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 SASH3O75995 380 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 RPS12P25398 132 aaKnown RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 POLR2BP30876 1174 aaKnown RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 SREBF1P36956 1147 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 KCNJ1P48048 391 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 CASP5P51878 434 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 TMEM62Q0P6H9 643 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 KRT81Q14533 505 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 NAB2Q15742 525 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 SLC17A8Q8NDX2 589 aa15.37■□□□□ 0.05
TMEM47-201ENST00000275954 MMTAG2Q9BU76 263 aaKnown RBP15.37■□□□□ 0.05
TMEM47-201ENST00000275954 SPC25Q9HBM1 224 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms