RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PLCB1Q9NQ66 1216 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 CEP72Q9P209 647 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 PPP2R2CQ9Y2T4 447 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 DAAM1Q9Y4D1 1078 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 CCDC169A6NNP5 214 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 MAFO75444 373 aaPredicted RBP16.78■□□□□ 0.28
COPS3-201ENST00000268717 GH1P01241 217 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 NAMPTP43490 491 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 KLK7P49862 253 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 TERF1P54274 439 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 ENPEPQ07075 957 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 PTPN14Q15678 1187 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 KSR1Q8IVT5 923 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 BSNDQ8WZ55 320 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 SYN2Q92777 582 aaPredicted RBP16.78■□□□□ 0.28
COPS3-201ENST00000268717 MMRN2Q9H8L6 949 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 FBXL5Q9UKA1 691 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 PLAGL2Q9UPG8 496 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 DENND3A2RUS2 1198 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 SOWAHDA6NJG2 315 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 EXOC3O60645 756 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 CCDC175P0C221 793 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 ARHGAP1Q07960 439 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.27
COPS3-201ENST00000268717 BRDTQ58F21 947 aaPredicted RBP16.77■□□□□ 0.27
COPS3-201ENST00000268717 RAD9BQ6WBX8 426 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 INTS8Q75QN2 995 aaKnown RBP16.77■□□□□ 0.27
COPS3-201ENST00000268717 NECAB2Q7Z6G3 386 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 CCDC170Q8IYT3 715 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 PPTC7Q8NI37 304 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 HTATIP2Q9BUP3 242 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 ABHD16BQ9H3Z7 469 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 FAM207AQ9NSI2 230 aaPredicted RBP16.77■□□□□ 0.27
COPS3-201ENST00000268717 AGPAT5Q9NUQ2 364 aa16.77■□□□□ 0.27
COPS3-201ENST00000268717 PHLPP2Q6ZVD8 1323 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 IGKV6-21A0A0C4DH24 114 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 SNAI1O95863 264 aaPredicted RBP16.76■□□□□ 0.27
COPS3-201ENST00000268717 ZNF865P0CJ78 1059 aaPredicted RBP16.76■□□□□ 0.27
COPS3-201ENST00000268717 TNNT1P13805 278 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 CYP2J2P51589 502 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 TMEM63BQ5T3F8 832 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 WDR59Q6PJI9 974 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 TOGARAM2Q6ZUX3 1019 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 REXO1L1PQ8IX06 675 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 XXYLT1Q8NBI6 393 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 TCP11Q8WWU5 503 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 BAP1Q92560 729 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 GLG1Q92896 1179 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 PRIMPOLQ96LW4 560 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 C16orf45Q96MC5 204 aaPredicted RBP16.76■□□□□ 0.27
COPS3-201ENST00000268717 PDGFCQ9NRA1 345 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 TRMT1Q9NXH9 659 aaKnown RBP16.76■□□□□ 0.27
COPS3-201ENST00000268717 MYO6Q9UM54 1294 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 ADGRG1Q9Y653 693 aa16.76■□□□□ 0.27
COPS3-201ENST00000268717 KIAA0391O15091 583 aaKnown RBP16.75■□□□□ 0.27
COPS3-201ENST00000268717 HBP1O60381 514 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 PIGRP01833 764 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 HOXD8P13378 290 aaPredicted RBP16.75■□□□□ 0.27
COPS3-201ENST00000268717 GARTP22102 1010 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 BFSP1Q12934 665 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 PLCB4Q15147 1175 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 EXOC3L4Q17RC7 722 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 PRPF38BQ5VTL8 546 aaKnown RBP16.75■□□□□ 0.27
COPS3-201ENST00000268717 GBP6Q6ZN66 633 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 IKZF4Q9H2S9 585 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 HSPBP1Q9NZL4 362 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 DNAH12Q6ZR08 3092 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 ADGRA3Q8IWK6 1321 aa16.75■□□□□ 0.27
COPS3-201ENST00000268717 EPHB6O15197 1021 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 PMM2O15305 246 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 P4HA2O15460 535 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 N4BP1O75113 896 aaKnown RBP16.74■□□□□ 0.27
COPS3-201ENST00000268717 NOL4O94818 638 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 KRT13P13646 458 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 GLRA2P23416 452 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 DCAF17Q5H9S7 520 aaPredicted RBP16.74■□□□□ 0.27
COPS3-201ENST00000268717 IER5Q5VY09 327 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 IQSEC1Q6DN90 963 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 PDXDC1Q6P996 788 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 FBXL18Q96ME1 805 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 LSM14BQ9BX40 385 aaKnown RBP16.74■□□□□ 0.27
COPS3-201ENST00000268717 GANQ9H2C0 597 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 C11orf49Q9H6J7 331 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 TMEM134Q9H6X4 195 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 ERAP1Q9NZ08 941 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
COPS3-201ENST00000268717 DUSP28Q4G0W2 176 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 TCERG1LQ5VWI1 586 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 CACNA2D4Q7Z3S7 1137 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 CCDC155Q8N6L0 562 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 COPS5Q92905 334 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 CBWD1Q9BRT8 395 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 PAXBP1Q9Y5B6 917 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 STYXL1Q9Y6J8 313 aa16.74■□□□□ 0.27
COPS3-201ENST00000268717 ZBTB42B2RXF5 422 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 NDUFA10O95299 355 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 COL6A1P12109 1028 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 AKR1A1P14550 325 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 FMO5P49326 533 aa16.73■□□□□ 0.27
COPS3-201ENST00000268717 ACVR2BQ13705 512 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms