RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 FCGRTP55899 365 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 C1orf220Q5T0J3 134 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 PDXDC1Q6P996 788 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.85■□□□□ 0.45
TPM1-201ENST00000267996 RDH13Q8NBN7 331 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 CCDC113Q9H0I3 377 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 NUCKS1Q9H1E3 243 aaKnown RBP17.85■□□□□ 0.45
TPM1-201ENST00000267996 TUT1Q9H6E5 874 aaKnown RBP17.85■□□□□ 0.45
TPM1-201ENST00000267996 SUGCTQ9HAC7 445 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 ZNHIT6Q9NWK9 470 aaKnown RBP17.85■□□□□ 0.45
TPM1-201ENST00000267996 SUCLA2Q9P2R7 463 aaPredicted RBP17.85■□□□□ 0.45
TPM1-201ENST00000267996 FBXL5Q9UKA1 691 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 Q9Y3F1 56 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 ADGRG1Q9Y653 693 aa17.85■□□□□ 0.45
TPM1-201ENST00000267996 KIAA0391O15091 583 aaKnown RBP17.84■□□□□ 0.45
TPM1-201ENST00000267996 PMM2O15305 246 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 ASAP2O43150 1006 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 DYNC1LI2O43237 492 aaPredicted RBP17.84■□□□□ 0.45
TPM1-201ENST00000267996 ADRB2P07550 413 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 SLC9A1P19634 815 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 GRM1Q13255 1194 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 SNRNP35Q16560 246 aaKnown RBP17.84■□□□□ 0.45
TPM1-201ENST00000267996 KLHDC7AQ5VTJ3 777 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 EFCAB12Q6NXP0 572 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 CBWD2Q8IUF1 395 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 PLEKHO2Q8TD55 490 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 POMGNT1Q8WZA1 660 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 SYN2Q92777 582 aaPredicted RBP17.84■□□□□ 0.45
TPM1-201ENST00000267996 CAPNS2Q96L46 248 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 MFSD14AQ96MC6 490 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 SIX2Q9NPC8 291 aa17.84■□□□□ 0.45
TPM1-201ENST00000267996 P4HA2O15460 535 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 AOC2O75106 756 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 TRIM49P0CI25 452 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 TRIM49CP0CI26 452 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 LIG4P49917 911 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 LACTBP83111 547 aaPredicted RBP17.83■□□□□ 0.45
TPM1-201ENST00000267996 DEFB115Q30KQ5 88 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 CBWD6Q4V339 395 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 CBWD3Q5JTY5 395 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 CBWD5Q5RIA9 395 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 ZPBP2Q6X784 338 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 RRAGAQ7L523 313 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 BICD1Q96G01 975 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 C2orf40Q9H1Z8 148 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 CREBZFQ9NS37 354 aa17.83■□□□□ 0.45
TPM1-201ENST00000267996 GOLGA8IPA6NC78 632 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 GOLGA6L9A6NEM1 432 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 LRRC53A6NM62 1247 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 GOLGA8JA6NMD2 632 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 KLRC1P26715 233 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 PSMC4P43686 418 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 POLR2FP61218 127 aaKnown RBP17.83■□□□□ 0.44
TPM1-201ENST00000267996 DLG4P78352 724 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 APBA1Q02410 837 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 POU5F1BQ06416 359 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 SLFN12LQ6IEE8 588 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 CACNA2D4Q7Z3S7 1137 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 GPD1LQ8N335 351 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 TMC2Q8TDI7 906 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 SAAL1Q96ER3 474 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 C16orf45Q96MC5 204 aaPredicted RBP17.83■□□□□ 0.44
TPM1-201ENST00000267996 ARHGAP39Q9C0H5 1083 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 KIAA1586Q9HCI6 787 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 GCNT4Q9P109 453 aa17.83■□□□□ 0.44
TPM1-201ENST00000267996 EPN1Q9Y6I3 576 aaPredicted RBP17.83■□□□□ 0.44
TPM1-201ENST00000267996 EVPLQ92817 2033 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 MSCO60682 206 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 N4BP1O75113 896 aaKnown RBP17.82■□□□□ 0.44
TPM1-201ENST00000267996 EDN1P05305 212 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 CCDC175P0C221 793 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 ACTN1P12814 892 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 UCHL3P15374 230 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 CLCN3P51790 818 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 PPP3CAQ08209 521 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 TFDP1Q14186 410 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 PTPN14Q15678 1187 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 TLK2Q86UE8 772 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 CCDC170Q8IYT3 715 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 RNF149Q8NC42 400 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 PARD3BQ8TEW8 1205 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 DESI2Q9BSY9 194 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 TARS2Q9BW92 718 aaKnown RBP17.82■□□□□ 0.44
TPM1-201ENST00000267996 CFHR5Q9BXR6 569 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 NFKBIZQ9BYH8 718 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 NLRC4Q9NPP4 1024 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 MYO6Q9UM54 1294 aa17.82■□□□□ 0.44
TPM1-201ENST00000267996 A0A0B4J269 797 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 EXTL3O43909 919 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 NDUFA10O95299 355 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 F2P00734 622 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 SRGAP2CP0DJJ0 459 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 TNNT1P13805 278 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 PTENP60484 403 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 MYL7Q01449 175 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 CYP24A1Q07973 514 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 HSP90AA2PQ14568 343 aaPredicted RBP17.81■□□□□ 0.44
TPM1-201ENST00000267996 TRIM65Q6PJ69 517 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 RHPN2Q8IUC4 686 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 ZBTB8OSQ8IWT0 167 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms