RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 PRKCBP05771 671 aa18.3■□□□□ 0.52
CHCHD3-201ENST00000262570 ABCD1P33897 745 aa18.3■□□□□ 0.52
CHCHD3-201ENST00000262570 PSMD2Q13200 908 aa18.3■□□□□ 0.52
CHCHD3-201ENST00000262570 TCTN1Q2MV58 587 aa18.3■□□□□ 0.52
CHCHD3-201ENST00000262570 CNKSR3Q6P9H4 555 aa18.3■□□□□ 0.52
CHCHD3-201ENST00000262570 SMARCE1Q969G3 411 aa18.3■□□□□ 0.52
CHCHD3-201ENST00000262570 TMX1Q9H3N1 280 aa18.3■□□□□ 0.52
CHCHD3-201ENST00000262570 TSPAN1O60635 241 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 ERLIN2O94905 339 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 GCNT3O95395 438 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 HOXA11P31270 313 aaPredicted RBP18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 CASP5P51878 434 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 STK4Q13043 487 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 ZC2HC1CQ53FD0 456 aaPredicted RBP18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 GLIS3Q8NEA6 775 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 CCDC47Q96A33 483 aaKnown RBP18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 GDF15Q99988 308 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 FTHL17Q9BXU8 183 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 NUP62CLQ9H1M0 184 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 SLC39A2Q9NP94 309 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 AGPAT5Q9NUQ2 364 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 TBX20Q9UMR3 447 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 PCDHB13Q9Y5F0 798 aa18.29■□□□□ 0.52
CHCHD3-201ENST00000262570 TTLL13PA6NNM8 815 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 B4GALT5O43286 388 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 EDN1P05305 212 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 MYBP10242 640 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 AXLP30530 894 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 ALCAMQ13740 583 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 TMEM240Q5SV17 173 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 ZNF365Q70YC5 407 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 CHST12Q9NRB3 414 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 RMND1Q9NWS8 449 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 KIAA1468Q9P260 1216 aa18.28■□□□□ 0.52
CHCHD3-201ENST00000262570 RANBP2P49792 3224 aaKnown RBP18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 FGBP02675 491 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 ARF4P18085 180 aaPredicted RBP18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 NCBP1Q09161 790 aaKnown RBP18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 STRN3Q13033 797 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 PRPF4BQ13523 1007 aaKnown RBP18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 IKBKEQ14164 716 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 DSC3Q14574 896 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 NFKBIBQ15653 356 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 KLHL40Q2TBA0 621 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 PSRC1Q6PGN9 363 aaPredicted RBP18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 EPM2AIP1Q7L775 607 aaPredicted RBP18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 MAP4K3Q8IVH8 894 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 KIAA0895Q8NCT3 520 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 HVCN1Q96D96 273 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.27■□□□□ 0.527e-16■□□□□ 10.3
CHCHD3-201ENST00000262570 PIN4Q9Y237 131 aaKnown RBP18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 USP20Q9Y2K6 914 aa18.27■□□□□ 0.52
CHCHD3-201ENST00000262570 CNTNAP2Q9UHC6 1331 aa18.27■□□□□ 0.51
CHCHD3-201ENST00000262570 A0A1B0GUA9 196 aa18.26■□□□□ 0.51
CHCHD3-201ENST00000262570 MGEA5O60502 916 aa18.26■□□□□ 0.51
CHCHD3-201ENST00000262570 ZSCAN20P17040 1043 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-201ENST00000262570 KCNA1Q09470 495 aa18.26■□□□□ 0.51
CHCHD3-201ENST00000262570 STXBP4Q6ZWJ1 553 aa18.26■□□□□ 0.51
CHCHD3-201ENST00000262570 RTN4RL1Q86UN2 441 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-201ENST00000262570 CPB2Q96IY4 423 aa18.26■□□□□ 0.51
CHCHD3-201ENST00000262570 MRPL4Q9BYD3 311 aaKnown RBP18.26■□□□□ 0.51
CHCHD3-201ENST00000262570 TSPYL2Q9H2G4 693 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-201ENST00000262570 ABHD14A-ACY1A0A1B0GW23 586 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 EIF3DO15371 548 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 BAIAP3O94812 1187 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 PRPF6O94906 941 aaKnown RBP18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 ACTN1P12814 892 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 L1TD1Q5T7N2 865 aaKnown RBP18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 NOTUMQ6P988 496 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 OTOP2Q7RTS6 562 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 ZNF507Q8TCN5 953 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 SCFD1Q8WVM8 642 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 LINC01599Q8WXQ3 324 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 ACO2Q99798 780 aaKnown RBP18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 ADAM2Q99965 735 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 TARS2Q9BW92 718 aaKnown RBP18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 RGS18Q9NS28 235 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 MAN1B1Q9UKM7 699 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 ENPP3O14638 875 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 PIGRP01833 764 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 ZPBP2Q6X784 338 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 ACCSQ96QU6 501 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 TRAIPQ9BWF2 469 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 TMEM63CQ9P1W3 806 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 TNFSF13BQ9Y275 285 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 GDAQ9Y2T3 454 aa18.25■□□□□ 0.51
CHCHD3-201ENST00000262570 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 EFCAB14O75071 495 aa18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 HOXD13P35453 343 aa18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 BMT2Q1RMZ1 405 aa18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 ZNF658Q5TYW1 1059 aaPredicted RBP18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 ATF7IP2Q5U623 682 aa18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 RBM43Q6ZSC3 357 aaKnown RBP18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 CDR2LQ86X02 465 aaPredicted RBP18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 HERVK_113Q902F9 699 aa18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 CCDC51Q96ER9 411 aa18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 GTPBP4Q9BZE4 634 aaKnown RBP18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 PDZD7Q9H5P4 517 aa18.24■□□□□ 0.51
CHCHD3-201ENST00000262570 TMEM206Q9H813 350 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms