RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ZNRF3Q9ULT6 936 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.42■■□□□ 1.5
MCF2L-201ENST00000261963 TISP43B9A030 160 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 K7ENM7 598 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 P4HBP07237 508 aaKnown RBP24.42■■□□□ 1.5
MCF2L-201ENST00000261963 HPDP32754 393 aaPredicted RBP24.42■■□□□ 1.5
MCF2L-201ENST00000261963 MRPS9P82933 396 aaKnown RBP24.42■■□□□ 1.5
MCF2L-201ENST00000261963 GHRHRQ02643 423 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 TKFCQ3LXA3 575 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 NIPA1Q7RTP0 329 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 SYCP3Q8IZU3 236 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 RDH13Q8NBN7 331 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 LMO3Q8TAP4 145 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 AGO4Q9HCK5 861 aaKnown RBP24.42■■□□□ 1.5
MCF2L-201ENST00000261963 UBIAD1Q9Y5Z9 338 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 CEP104O60308 925 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 TNNC1P63316 161 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 KLHL7Q8IXQ5 586 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 TMBIM4Q9HC24 238 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 HAUS2Q9NVX0 235 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 PLAAQ9Y263 795 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 A0A1B0GUA9 196 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 DPEP1P16444 411 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 SLC8A1P32418 973 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 NPEPPSP55786 919 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 SPP2Q13103 211 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 DGKZQ13574 1117 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 MYBPC2Q14324 1141 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 ANKRD20A8PQ5CZ79 823 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 FMNL3Q8IVF7 1028 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 OSBPL7Q9BZF2 842 aa24.41■■□□□ 1.5
MCF2L-201ENST00000261963 TPX2Q9ULW0 747 aaKnown RBP24.41■■□□□ 1.5
MCF2L-201ENST00000261963 MYH11P35749 1972 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 DNM1LO00429 736 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 NEBLO76041 1014 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 RXRBP28702 533 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 CLNS1AP54105 237 aaKnown RBP24.4■■□□□ 1.5
MCF2L-201ENST00000261963 IFFO1Q0D2I5 559 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 PHLDB3Q6NSJ2 640 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 PEX26Q7Z412 305 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 NT5DC3Q86UY8 548 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 SUCLA2Q9P2R7 463 aaPredicted RBP24.4■■□□□ 1.5
MCF2L-201ENST00000261963 NCANO14594 1321 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 LMNB1P20700 586 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 PAX7P23759 505 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 RARRES1P49788 294 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 DLG4P78352 724 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 CXCL9Q07325 125 aa24.4■■□□□ 1.5
MCF2L-201ENST00000261963 SYTL5Q8TDW5 730 aaPredicted RBP24.4■■□□□ 1.5
MCF2L-201ENST00000261963 DBR1Q9UK59 544 aaKnown RBP24.4■■□□□ 1.5
MCF2L-201ENST00000261963 IGSF9BQ9UPX0 1349 aa24.39■■□□□ 1.5
MCF2L-201ENST00000261963 PCNX4Q63HM2 1172 aa24.39■■□□□ 1.5
MCF2L-201ENST00000261963 CPXCR1Q8N123 301 aa24.39■■□□□ 1.5
MCF2L-201ENST00000261963 LMBR1Q8WVP7 490 aa24.39■■□□□ 1.5
MCF2L-201ENST00000261963 ATP6V0A4Q9HBG4 840 aa24.39■■□□□ 1.5
MCF2L-201ENST00000261963 OSGEPQ9NPF4 335 aa24.39■■□□□ 1.5
MCF2L-201ENST00000261963 WDR46O15213 610 aaKnown RBP24.39■■□□□ 1.49
MCF2L-201ENST00000261963 ALAS1P13196 640 aa24.39■■□□□ 1.49
MCF2L-201ENST00000261963 DAAM2Q86T65 1068 aa24.39■■□□□ 1.49
MCF2L-201ENST00000261963 NIM1KQ8IY84 436 aa24.39■■□□□ 1.49
MCF2L-201ENST00000261963 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.39■■□□□ 1.493e-7■□□□□ 9.1
MCF2L-201ENST00000261963 PCIF1Q9H4Z3 704 aa24.39■■□□□ 1.49
MCF2L-201ENST00000261963 RAVER2Q9HCJ3 691 aaKnown RBP24.39■■□□□ 1.49
MCF2L-201ENST00000261963 LARSQ9P2J5 1176 aaKnown RBP24.39■■□□□ 1.49
MCF2L-201ENST00000261963 NOC2LQ9Y3T9 749 aaKnown RBP24.39■■□□□ 1.49
MCF2L-201ENST00000261963 PGRMC1O00264 195 aaKnown RBP24.38■■□□□ 1.49
MCF2L-201ENST00000261963 MAPTP10636 758 aaKnown RBP24.38■■□□□ 1.49
MCF2L-201ENST00000261963 LRIG3Q6UXM1 1119 aa24.38■■□□□ 1.49
MCF2L-201ENST00000261963 PALB2Q86YC2 1186 aa24.38■■□□□ 1.49
MCF2L-201ENST00000261963 MCF2L2Q86YR7 1114 aa24.38■■□□□ 1.49
MCF2L-201ENST00000261963 RASGEF1CQ8N431 466 aa24.38■■□□□ 1.49
MCF2L-201ENST00000261963 HES6Q96HZ4 224 aa24.38■■□□□ 1.49
MCF2L-201ENST00000261963 HOMER2Q9NSB8 354 aa24.38■■□□□ 1.49
MCF2L-201ENST00000261963 TRAPPC3O43617 180 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 TMEM253P0C7T8 217 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 MYZAPP0CAP1 466 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 HSPA9P38646 679 aaKnown RBP24.37■■□□□ 1.49
MCF2L-201ENST00000261963 ERVK-9P63128 1117 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 E2F5Q15329 346 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 ARHGAP44Q17R89 818 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 SYCE1Q8N0S2 351 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 CALR3Q96L12 384 aaKnown RBP24.37■■□□□ 1.49
MCF2L-201ENST00000261963 SH2D3AQ9BRG2 576 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 CBWD1Q9BRT8 395 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 AP1M1Q9BXS5 423 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 SLC38A10Q9HBR0 1119 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 BCS1LQ9Y276 419 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 LOXHD1Q8IVV2 1947 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 BUB1BO60566 1050 aaPredicted RBP24.37■■□□□ 1.49
MCF2L-201ENST00000261963 LYPLA2O95372 231 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 QARSP47897 775 aaKnown RBP24.37■■□□□ 1.49
MCF2L-201ENST00000261963 RASA3Q14644 834 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 TNIP1Q15025 636 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 TLDC1Q6P9B6 456 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 SLC35G2Q8TBE7 412 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 TMEM174Q8WUU8 243 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 RFFLQ8WZ73 363 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 TMEM206Q9H813 350 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 TAS2R14Q9NYV8 317 aa24.37■■□□□ 1.49
MCF2L-201ENST00000261963 TMEM150BA6NC51 233 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms