RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 LRRC1Q9BTT6 524 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 GPR88Q9GZN0 384 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 CYP26B1Q9NR63 512 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 EHD2Q9NZN4 543 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 STIM2Q9P246 746 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 PACSIN2Q9UNF0 486 aaPredicted RBP16.39■□□□□ 0.21
DDX49-201ENST00000247003 NCANO14594 1321 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 GOLGA8IPA6NC78 632 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 GOLGA8JA6NMD2 632 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 HNRNPDLO14979 420 aaKnown RBP16.38■□□□□ 0.21
DDX49-201ENST00000247003 ZNF862O60290 1169 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 USP2O75604 605 aaPredicted RBP16.38■□□□□ 0.21
DDX49-201ENST00000247003 SUPT20HL2P0C7V6 817 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 POLGP54098 1239 aaPredicted RBP16.38■□□□□ 0.21
DDX49-201ENST00000247003 HIRAP54198 1017 aaPredicted RBP16.38■□□□□ 0.21
DDX49-201ENST00000247003 GALCP54803 685 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 CCNI2Q6ZMN8 369 aaPredicted RBP16.38■□□□□ 0.21
DDX49-201ENST00000247003 DAAM2Q86T65 1068 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 SULF1Q8IWU6 871 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 SLC30A5Q8TAD4 765 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 LMO3Q8TAP4 145 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 RFFLQ8WZ73 363 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 POMGNT1Q8WZA1 660 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 MS4A14Q96JA4 679 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 NTPCRQ9BSD7 190 aaKnown RBP16.38■□□□□ 0.21
DDX49-201ENST00000247003 KIFC3Q9BVG8 833 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 RBM12Q9NTZ6 932 aaKnown RBP16.38■□□□□ 0.21
DDX49-201ENST00000247003 SMARCAL1Q9NZC9 954 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 DOCK5Q9H7D0 1870 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 A0A0G2JMZ2 1700 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 ZMYND10O75800 440 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 SCP2P22307 547 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 KRT39Q6A163 491 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 ABHD15Q6UXT9 468 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 LRRC57Q8N9N7 239 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 SAAL1Q96ER3 474 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 TMEM117Q9H0C3 514 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 MED4Q9NPJ6 270 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 ZNF302Q9NR11 478 aa16.38■□□□□ 0.21
DDX49-201ENST00000247003 ADARB2Q9NS39 739 aaKnown RBP16.38■□□□□ 0.21
DDX49-201ENST00000247003 ANKRD63C9JTQ0 380 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 ADRB2P07550 413 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 ICAM3P32942 547 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 MFAP3P55082 362 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 MTERF2Q49AM1 385 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 CBWD2Q8IUF1 395 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 ARHGEF19Q8IW93 802 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 CALR3Q96L12 384 aaKnown RBP16.37■□□□□ 0.21
DDX49-201ENST00000247003 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
DDX49-201ENST00000247003 AGPAT1Q99943 283 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 FHDC1Q9C0D6 1143 aaPredicted RBP16.37■□□□□ 0.21
DDX49-201ENST00000247003 POLR3FQ9H1D9 316 aaPredicted RBP16.37■□□□□ 0.21
DDX49-201ENST00000247003 TMEM8AQ9HCN3 771 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 LCTP09848 1927 aa16.37■□□□□ 0.21
DDX49-201ENST00000247003 PTPRFP10586 1907 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 LRRIQ3A6PVS8 624 aaPredicted RBP16.36■□□□□ 0.21
DDX49-201ENST00000247003 FOXN3O00409 490 aaPredicted RBP16.36■□□□□ 0.21
DDX49-201ENST00000247003 SORBS3O60504 671 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 ABCB4P21439 1286 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 GARTP22102 1010 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 USP8P40818 1118 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 IREB2P48200 963 aaKnown RBP16.36■□□□□ 0.21
DDX49-201ENST00000247003 EPHB4P54760 987 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 STRN3Q13033 797 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 BRDTQ58F21 947 aaPredicted RBP16.36■□□□□ 0.21
DDX49-201ENST00000247003 LBX2Q6XYB7 198 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 GADL1Q6ZQY3 521 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.36■□□□□ 0.21
DDX49-201ENST00000247003 IFT20Q8IY31 132 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 GPD1LQ8N335 351 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 PPM1KQ8N3J5 372 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 FAM71BQ8TC56 605 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 TMC2Q8TDI7 906 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 BSNDQ8WZ55 320 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 CCDC127Q96BQ5 260 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 SUCLA2Q9P2R7 463 aaPredicted RBP16.36■□□□□ 0.21
DDX49-201ENST00000247003 AMFRQ9UKV5 643 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 OTOFQ9HC10 1997 aa16.36■□□□□ 0.21
DDX49-201ENST00000247003 ANKRD62A6NC57 917 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 STBD1O95210 358 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 OATP04181 439 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 TNFRSF8P28908 595 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 ADSSP30520 456 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 GTF2H1P32780 548 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 ALDH5A1P51649 535 aaPredicted RBP16.35■□□□□ 0.21
DDX49-201ENST00000247003 IRX3P78415 501 aaPredicted RBP16.35■□□□□ 0.21
DDX49-201ENST00000247003 MAP2K1Q02750 393 aaPredicted RBP16.35■□□□□ 0.21
DDX49-201ENST00000247003 ENPEPQ07075 957 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 EMC2Q15006 297 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 TREML2Q5T2D2 321 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 CYFIP1Q7L576 1253 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 DNAAF5Q86Y56 855 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 RIOX2Q8IUF8 465 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 RHOT2Q8IXI1 618 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 USP38Q8NB14 1042 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 SYT11Q9BT88 431 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 USP20Q9Y2K6 914 aa16.35■□□□□ 0.21
DDX49-201ENST00000247003 MYH9P35579 1960 aaKnown RBP16.35■□□□□ 0.21
DDX49-201ENST00000247003 H3BQF6 201 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms