RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 NBPF9Q3BBW0 867 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 CELF1Q92879 486 aaKnown RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 MTRQ99707 1265 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 TRIM51Q9BSJ1 452 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 TDRD3Q9H7E2 651 aaKnown RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 POU5F1BQ06416 359 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 NR1H3Q13133 447 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 GPR162Q16538 588 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 FRA10AC1Q70Z53 315 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 SRBD1Q8N5C6 995 aaKnown RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 TTC13Q8NBP0 860 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 EIF2AK1Q9BQI3 630 aaKnown RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 TRPC5Q9UL62 973 aaPredicted RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 TARSL2A2RTX5 802 aaKnown RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 MKRN4PQ13434 485 aaPredicted RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 ATXN7L3BQ96GX2 97 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 ALDH8A1Q9H2A2 487 aaPredicted RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 ADA2Q9NZK5 511 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 IP6K2Q9UHH9 426 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 TCP11X1B4DZS4 312 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 AP2B1P63010 937 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 DRP2Q13474 957 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 LMBRD2Q68DH5 695 aaPredicted RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 KRT39Q6A163 491 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 GIPC2Q8TF65 315 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 LXNQ9BS40 222 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 A0A1W2PQC6 194 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 FAM187AA6NFU0 413 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 GOLGA8RI6L899 631 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 PSMC1P62191 440 aaKnown RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 ROR1Q01973 937 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 FBXW10Q5XX13 1052 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 CYFIP1Q7L576 1253 aa14.23□□□□□ -0.13
NEK4-201ENST00000233027 RIN2Q8WYP3 895 aaPredicted RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 POLR3CQ9BUI4 534 aaPredicted RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 QTRT2Q9H974 415 aaKnown RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 KPNA7A9QM74 516 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 PIK3R2O00459 728 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 HADHAP40939 763 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 SUPT20HL1Q3ZLR7 823 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 SWSAP1Q6NVH7 229 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 RNPC3Q96LT9 517 aaKnown RBP14.22□□□□□ -0.13
NEK4-201ENST00000233027 STOML1Q9UBI4 398 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 NPHP4O75161 1426 aaPredicted RBP14.22□□□□□ -0.13
NEK4-201ENST00000233027 ZBTB22O15209 634 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 CATSPER4Q7RTX7 472 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 NUDCD3Q8IVD9 361 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 SNX12Q9UMY4 172 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 RFX7Q2KHR2 1363 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 ZBTB17Q13105 803 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 ZNF473Q8WTR7 871 aaKnown RBP14.22□□□□□ -0.13
NEK4-201ENST00000233027 POLR3FQ9H1D9 316 aaPredicted RBP14.22□□□□□ -0.13
NEK4-201ENST00000233027 AGPAT5Q9NUQ2 364 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 SETD1BQ9UPS6 1966 aaKnown RBP14.22□□□□□ -0.13
NEK4-201ENST00000233027 E2F6O75461 281 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 MYL3P08590 195 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 NAALADL2Q58DX5 795 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 C16orf87Q6PH81 154 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 RNF135Q8IUD6 432 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 OR2W6PQ8NHA6 318 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 SLC26A7Q8TE54 656 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 SLITRK6Q9H5Y7 841 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 GABBR1Q9UBS5 961 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 WARS2Q9UGM6 360 aaKnown RBP14.22□□□□□ -0.13
NEK4-201ENST00000233027 SUN2Q9UH99 717 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 NRKQ7Z2Y5 1582 aa14.22□□□□□ -0.13
NEK4-201ENST00000233027 CYP26A1O43174 497 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 HSPA9P38646 679 aaKnown RBP14.21□□□□□ -0.13
NEK4-201ENST00000233027 ARSEP51690 589 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 TFDP2Q14188 446 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 QRICH1Q2TAL8 776 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 RHPN2Q8IUC4 686 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 GUF1Q8N442 669 aaKnown RBP14.21□□□□□ -0.13
NEK4-201ENST00000233027 RFFLQ8WZ73 363 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 RAPGEF5Q92565 580 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 VPS39Q96JC1 886 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 BTBD6Q96KE9 485 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 SPATA17Q96L03 361 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 LRRC7Q96NW7 1537 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 MROH7-TTC4A0A0A0MT08 1334 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 hCG_2014768A0A024R1R8 64 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 NMT1P30419 496 aaKnown RBP14.21□□□□□ -0.13
NEK4-201ENST00000233027 KLK7P49862 253 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 ARHGDIAP52565 204 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 EXOSC10Q01780 885 aaKnown RBP14.21□□□□□ -0.13
NEK4-201ENST00000233027 NME3Q13232 169 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 RCSD1Q6JBY9 416 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 KIAA1841Q6NSI8 718 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 CYP26B1Q9NR63 512 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 POLR1AO95602 1720 aaPredicted RBP14.21□□□□□ -0.13
NEK4-201ENST00000233027 MAP3K4Q9Y6R4 1608 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 CHN1P15882 459 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 NPR1P16066 1061 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 CAPRIN1Q14444 709 aaKnown RBP14.21□□□□□ -0.13
NEK4-201ENST00000233027 MAPK6Q16659 721 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 PPP1R18Q6NYC8 613 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 PSPC1Q8WXF1 523 aaKnown RBP14.21□□□□□ -0.13
NEK4-201ENST00000233027 FAM20AQ96MK3 541 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 AGPAT1Q99943 283 aa14.21□□□□□ -0.13
NEK4-201ENST00000233027 NCAPD2Q15021 1401 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms