RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 SLC17A8Q8NDX2 589 aa8.66□□□□□ -1.02
HMGXB4-201ENST00000216106 POP1Q99575 1024 aaKnown RBP8.66□□□□□ -1.02
HMGXB4-201ENST00000216106 TMEM117Q9H0C3 514 aa8.66□□□□□ -1.02
HMGXB4-201ENST00000216106 CYP26B1Q9NR63 512 aa8.66□□□□□ -1.02
HMGXB4-201ENST00000216106 DMGDHQ9UI17 866 aaKnown RBP8.66□□□□□ -1.02
HMGXB4-201ENST00000216106 EXOC7Q9UPT5 735 aa8.66□□□□□ -1.02
HMGXB4-201ENST00000216106 CSADQ9Y600 493 aa8.66□□□□□ -1.02
HMGXB4-201ENST00000216106 LRRIQ3A6PVS8 624 aaPredicted RBP8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 N4BP1O75113 896 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 STAM2O75886 525 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 DGAT1O75907 488 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 MCM3P25205 808 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 GALCP54803 685 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 TERF2Q15554 542 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 STXBP2Q15833 593 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 SLC39A4Q6P5W5 647 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 LBX2Q6XYB7 198 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 SLC30A5Q8TAD4 765 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 UBE2Q2Q8WVN8 375 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 KAT5Q92993 513 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 A0A0G2JMZ2 1700 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 KCNK3O14649 394 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 HNRNPDLO14979 420 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 DKC1O60832 514 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 MIS18BP1Q6P0N0 1132 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 SULF1Q8IWU6 871 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 LRRC57Q8N9N7 239 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 SLC20A1Q8WUM9 679 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 POMGNT1Q8WZA1 660 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 DCPSQ96C86 337 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 OTUD5Q96G74 571 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 SYT11Q9BT88 431 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 ATP6V0A4Q9HBG4 840 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 OSGEPQ9NPF4 335 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 TOPORSQ9NS56 1045 aaPredicted RBP8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 TAS2R14Q9NYV8 317 aa8.65□□□□□ -1.02
HMGXB4-201ENST00000216106 IRF6O14896 467 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 SUPT20HL2P0C7V6 817 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 RFX1P22670 979 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 SNRPFP62306 86 aaKnown RBP8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 DMTNQ08495 405 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 IFI16Q16666 785 aaKnown RBP8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 MAP9Q49MG5 647 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 MCPH1Q8NEM0 835 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 CHST13Q8NET6 341 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 ELMO3Q96BJ8 720 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 BICD1Q96G01 975 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 PAGR1Q9BTK6 254 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 POLR3FQ9H1D9 316 aaPredicted RBP8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 ELP3Q9H9T3 547 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 ADARB2Q9NS39 739 aaKnown RBP8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 IGSF9BQ9UPX0 1349 aa8.65□□□□□ -1.03
HMGXB4-201ENST00000216106 MAPK13O15264 365 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 P4HA2O15460 535 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 CCDC172P0C7W6 258 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 USP8P40818 1118 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 ALDH5A1P51649 535 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 RPS6KA1Q15418 735 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 C8orf74Q6P047 294 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 NCAPG2Q86XI2 1143 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 PPM1KQ8N3J5 372 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 DNERQ8NFT8 737 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 PLEKHA4Q9H4M7 779 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 RNF181Q9P0P0 153 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 USP20Q9Y2K6 914 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 EIF3JO75822 258 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 KIF4AO95239 1232 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 ATP4AP20648 1035 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 TNFAIP3P21580 790 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 POLGP54098 1239 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 KIF22Q14807 665 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 DAAM2Q86T65 1068 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 PARD3BQ8TEW8 1205 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 TAF4BQ92750 862 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 SEMA4DQ92854 862 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 HVCN1Q96D96 273 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 CLMNQ96JQ2 1002 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 FAM84AQ96KN4 292 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 NTPCRQ9BSD7 190 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 C17orf75Q9HAS0 396 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 PDLIM7Q9NR12 457 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 ATP8B3O60423 1300 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 SYNGAP1Q96PV0 1343 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 DLATP10515 647 aaKnown RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 EMC2Q15006 297 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 XKR3Q5GH77 459 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 CCNI2Q6ZMN8 369 aaPredicted RBP8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 MOB2Q70IA6 237 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 EEPD1Q7L9B9 569 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 TAS1R3Q7RTX0 852 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 PEX26Q7Z412 305 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 TMEM143Q96AN5 459 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 IFT74Q96LB3 600 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 SPATC1LQ9H0A9 340 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 R3HDMLQ9H3Y0 253 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 ZNF302Q9NR11 478 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 RNF14Q9UBS8 474 aa8.64□□□□□ -1.03
HMGXB4-201ENST00000216106 INTUQ9ULD6 942 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms