RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CCDC60Q8IWA6 550 aaPredicted RBP8.95□□□□□ -0.98
VAMP3-201ENST00000054666 FAM71BQ8TC56 605 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 POMGNT1Q8WZA1 660 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 MS4A14Q96JA4 679 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 LRRC1Q9BTT6 524 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 GPR88Q9GZN0 384 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 GOLGA8IPA6NC78 632 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 GOLGA8JA6NMD2 632 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 PMM2O15305 246 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 ZNF862O60290 1169 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 ADRB2P07550 413 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 SUPT20HL2P0C7V6 817 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 ABCB4P21439 1286 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 CNGA1P29973 690 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 POLGP54098 1239 aaPredicted RBP8.95□□□□□ -0.98
VAMP3-201ENST00000054666 EPHB4P54760 987 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 VGLL4Q14135 290 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 XKR3Q5GH77 459 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 KRT39Q6A163 491 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 PHLDB3Q6NSJ2 640 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 CCNI2Q6ZMN8 369 aaPredicted RBP8.95□□□□□ -0.98
VAMP3-201ENST00000054666 CBWD2Q8IUF1 395 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 GSPT2Q8IYD1 628 aaKnown RBP8.95□□□□□ -0.98
VAMP3-201ENST00000054666 LRRC57Q8N9N7 239 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 SLC30A5Q8TAD4 765 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 SAAL1Q96ER3 474 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 POLR3FQ9H1D9 316 aaPredicted RBP8.95□□□□□ -0.98
VAMP3-201ENST00000054666 CYP26B1Q9NR63 512 aa8.95□□□□□ -0.98
VAMP3-201ENST00000054666 MYH9P35579 1960 aaKnown RBP8.94□□□□□ -0.98
VAMP3-201ENST00000054666 ANKRD62A6NC57 917 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 LRRIQ3A6PVS8 624 aaPredicted RBP8.94□□□□□ -0.98
VAMP3-201ENST00000054666 SPATA31C2B4DYI2 1134 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 H3BQF6 201 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 PGRMC1O00264 195 aaKnown RBP8.94□□□□□ -0.98
VAMP3-201ENST00000054666 RGS20O76081 388 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 TNFRSF8P28908 595 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 USP8P40818 1118 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 MFAP3P55082 362 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 MTERF2Q49AM1 385 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 EMBQ6PCB8 327 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 ARHGEF19Q8IW93 802 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 SULF1Q8IWU6 871 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 RHOT2Q8IXI1 618 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 IFT20Q8IY31 132 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 PPM1KQ8N3J5 372 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 GOLGA6L1Q8N7Z2 621 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 USP38Q8NB14 1042 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 LMO3Q8TAP4 145 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 CCDC127Q96BQ5 260 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 DCPSQ96C86 337 aaKnown RBP8.94□□□□□ -0.98
VAMP3-201ENST00000054666 CALR3Q96L12 384 aaKnown RBP8.94□□□□□ -0.98
VAMP3-201ENST00000054666 AGPAT1Q99943 283 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 TMEM117Q9H0C3 514 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 TMEM8AQ9HCN3 771 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 SUCLA2Q9P2R7 463 aaPredicted RBP8.94□□□□□ -0.98
VAMP3-201ENST00000054666 AMFRQ9UKV5 643 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 SNCAIPQ9Y6H5 919 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 DOCK5Q9H7D0 1870 aa8.94□□□□□ -0.98
VAMP3-201ENST00000054666 ANKRD63C9JTQ0 380 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 FOXN3O00409 490 aaPredicted RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 CEP104O60308 925 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 SORBS3O60504 671 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 HEXIM1O94992 359 aaKnown RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 GARTP22102 1010 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 SCP2P22307 547 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 GTF2H1P32780 548 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 ICAM3P32942 547 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 LIG4P49917 911 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 IRX3P78415 501 aaPredicted RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 SLC7A5Q01650 507 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 MAP2K1Q02750 393 aaPredicted RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 STRN3Q13033 797 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 EMC2Q15006 297 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 BRDTQ58F21 947 aaPredicted RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 ABHD15Q6UXT9 468 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 DNAAF5Q86Y56 855 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 GPD1LQ8N335 351 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 TMC2Q8TDI7 906 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 AENQ8WTP8 325 aaKnown RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 BSNDQ8WZ55 320 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 NT5C1BQ96P26 610 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 MPHOSPH6Q99547 160 aaKnown RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 NTPCRQ9BSD7 190 aaKnown RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 SYT11Q9BT88 431 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 ZNF302Q9NR11 478 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 ADARB2Q9NS39 739 aaKnown RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 VPS18Q9P253 973 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 HPCAL4Q9UM19 191 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 LCTP09848 1927 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 PTPRFP10586 1907 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 A0A0G2JMZ2 1700 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 USP2O75604 605 aaPredicted RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 OATP04181 439 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 MYBL2P10244 700 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 ADSSP30520 456 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 IREB2P48200 963 aaKnown RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 PDE6CP51160 858 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 ALDH5A1P51649 535 aaPredicted RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 HIRAP54198 1017 aaPredicted RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 ENPEPQ07075 957 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms