RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 CLSTN2Q9H4D0 955 aa11.09□□□□□ -0.63
CD9-201ENST00000009180 MRPL44Q9H9J2 332 aaKnown RBP11.09□□□□□ -0.63
CD9-201ENST00000009180 C17orf75Q9HAS0 396 aa11.09□□□□□ -0.63
CD9-201ENST00000009180 EXOC1Q9NV70 894 aa11.09□□□□□ -0.63
CD9-201ENST00000009180 PIN4Q9Y237 131 aaKnown RBP11.09□□□□□ -0.63
CD9-201ENST00000009180 SQORQ9Y6N5 450 aa11.09□□□□□ -0.63
CD9-201ENST00000009180 PVALEFA0A1B0GWK0 134 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 TISP43B9A030 160 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 GPR182O15218 404 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 GCNT3O95395 438 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 FGBP02675 491 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 HOXA11P31270 313 aaPredicted RBP11.08□□□□□ -0.64
CD9-201ENST00000009180 EFNA5P52803 228 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 SMTNP53814 917 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 KCNA1Q09470 495 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 DSC3Q14574 896 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 ISM2Q6H9L7 571 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.08□□□□□ -0.64
CD9-201ENST00000009180 TMCO2Q7Z6W1 182 aaPredicted RBP11.08□□□□□ -0.64
CD9-201ENST00000009180 RTN4RL1Q86UN2 441 aaPredicted RBP11.08□□□□□ -0.64
CD9-201ENST00000009180 RPUSD2Q8IZ73 545 aaKnown RBP11.08□□□□□ -0.64
CD9-201ENST00000009180 ADAM2Q99965 735 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 NTPCRQ9BSD7 190 aaKnown RBP11.08□□□□□ -0.64
CD9-201ENST00000009180 UBE2OQ9C0C9 1292 aaKnown RBP11.08□□□□□ -0.64
CD9-201ENST00000009180 FZD8Q9H461 694 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 SLC39A2Q9NP94 309 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 OLFML3Q9NRN5 406 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 AGPAT5Q9NUQ2 364 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 CXXC1Q9P0U4 656 aaPredicted RBP11.08□□□□□ -0.64
CD9-201ENST00000009180 SEL1LQ9UBV2 794 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 PCDHA5Q9Y5H7 936 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 CNTNAP2Q9UHC6 1331 aa11.08□□□□□ -0.64
CD9-201ENST00000009180 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.07□□□□□ -0.64
CD9-201ENST00000009180 ZBBXA8MT70 800 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 K7ERI5 159 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 BIN1O00499 593 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 PPP1R37O75864 691 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 PRPF6O94906 941 aaKnown RBP11.07□□□□□ -0.64
CD9-201ENST00000009180 MYL1P05976 194 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 PFKMP08237 780 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 ARF4P18085 180 aaPredicted RBP11.07□□□□□ -0.64
CD9-201ENST00000009180 DEFB103AP81534 67 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 STK4Q13043 487 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 PRPF4BQ13523 1007 aaKnown RBP11.07□□□□□ -0.64
CD9-201ENST00000009180 SHHQ15465 462 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 MAPK6Q16659 721 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 EEF1DP3Q658K8 133 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 PSRC1Q6PGN9 363 aaPredicted RBP11.07□□□□□ -0.64
CD9-201ENST00000009180 ZNF720Q7Z2F6 126 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 SMYD4Q8IYR2 804 aaPredicted RBP11.07□□□□□ -0.64
CD9-201ENST00000009180 KIAA0895Q8NCT3 520 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 TET1Q8NFU7 2136 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 APBB2Q92870 758 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 SMARCE1Q969G3 411 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 TARS2Q9BW92 718 aaKnown RBP11.07□□□□□ -0.64
CD9-201ENST00000009180 STRA6Q9BX79 667 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 NUP62CLQ9H1M0 184 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 PDZD7Q9H5P4 517 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 PRMT7Q9NVM4 692 aaPredicted RBP11.07□□□□□ -0.64
CD9-201ENST00000009180 GDAQ9Y2T3 454 aa11.07□□□□□ -0.64
CD9-201ENST00000009180 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
CD9-201ENST00000009180 ZMYM2Q9UBW7 1377 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 LAMA2P24043 3122 aaKnown RBP11.06□□□□□ -0.64
CD9-201ENST00000009180 ACKR2O00590 384 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 RHOBTB3O94955 611 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 MBD3O95983 291 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 ACTN1P12814 892 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 HOXD13P35453 343 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 WDR5P61964 334 aaKnown RBP11.06□□□□□ -0.64
CD9-201ENST00000009180 GTF2BQ00403 316 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 STRN3Q13033 797 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 IKBKEQ14164 716 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 FAM187BQ17R55 369 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 UBXN11Q5T124 520 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 L1TD1Q5T7N2 865 aaKnown RBP11.06□□□□□ -0.64
CD9-201ENST00000009180 TWF2Q6IBS0 349 aaKnown RBP11.06□□□□□ -0.64
CD9-201ENST00000009180 EPM2AIP1Q7L775 607 aaPredicted RBP11.06□□□□□ -0.64
CD9-201ENST00000009180 ZBTB33Q86T24 672 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 MAP4K3Q8IVH8 894 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 NELFCDQ8IXH7 590 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 BICD1Q96G01 975 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 CCDC34Q96HJ3 373 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 ZBTB45Q96K62 511 aaPredicted RBP11.06□□□□□ -0.64
CD9-201ENST00000009180 EIF2AQ9BY44 585 aaKnown RBP11.06□□□□□ -0.64
CD9-201ENST00000009180 MRPL4Q9BYD3 311 aaKnown RBP11.06□□□□□ -0.64
CD9-201ENST00000009180 ST6GALNAC4Q9H4F1 302 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 HOOK1Q9UJC3 728 aaKnown RBP11.06□□□□□ -0.64
CD9-201ENST00000009180 MAN1B1Q9UKM7 699 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 TBX20Q9UMR3 447 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 MAPK8IP1Q9UQF2 711 aa11.06□□□□□ -0.64
CD9-201ENST00000009180 MYH11P35749 1972 aa11.05□□□□□ -0.64
CD9-201ENST00000009180 ABHD14A-ACY1A0A1B0GW23 586 aa11.05□□□□□ -0.64
CD9-201ENST00000009180 ANKRD63C9JTQ0 380 aa11.05□□□□□ -0.64
CD9-201ENST00000009180 H0YCG3 227 aa11.05□□□□□ -0.64
CD9-201ENST00000009180 ENPP3O14638 875 aa11.05□□□□□ -0.64
CD9-201ENST00000009180 HNRNPDLO14979 420 aaKnown RBP11.05□□□□□ -0.64
CD9-201ENST00000009180 SMC2O95347 1197 aa11.05□□□□□ -0.64
CD9-201ENST00000009180 NPTXRO95502 500 aa11.05□□□□□ -0.64
CD9-201ENST00000009180 HARSP12081 509 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms