RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 PCDHA7Q9UN72 937 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 PIN4Q9Y237 131 aaKnown RBP16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 YBX2Q9Y2T7 364 aaKnown RBP16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 CHD9Q3L8U1 2897 aa16.32■□□□□ 0.2
CDC42BPB-209ENST00000634889 INO80B-WBP1J3KQ70 363 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 AXLP30530 894 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 EFNA5P52803 228 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 NCBP1Q09161 790 aaKnown RBP16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 MAPK7Q13164 816 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 DMP1Q13316 513 aaPredicted RBP16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 MCM6Q14566 821 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 GPBP1Q86WP2 473 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 DAW1Q8N136 415 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 LEO1Q8WVC0 666 aaPredicted RBP16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 BSNDQ8WZ55 320 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 YME1L1Q96TA2 773 aa16.31■□□□□ 0.2
CDC42BPB-209ENST00000634889 PHLPP2Q6ZVD8 1323 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 A0A0U1RQF3 1178 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 UPP2O95045 317 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 CA3P07451 260 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 SKIP12755 728 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 MYOGP15173 224 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 STAT6P42226 847 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 FAM189BP81408 668 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 FAM187BQ17R55 369 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 NAALADL2Q58DX5 795 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 ARSHQ5FYA8 562 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 PPP2R2DQ66LE6 453 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 FAM117BQ6P1L5 589 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 SP7Q8TDD2 431 aaPredicted RBP16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 PRIMPOLQ96LW4 560 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 NKX2-4Q9H2Z4 354 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 PRMT7Q9NVM4 692 aaPredicted RBP16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 TMEM161AQ9NX61 479 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 LRFN2Q9ULH4 789 aa16.3■□□□□ 0.2
CDC42BPB-209ENST00000634889 SZT2Q5T011 3432 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 A0A087X0B3 334 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 TSPAN1O60635 241 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 DGKIO75912 1065 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 PLS3P13797 630 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 HOXA11P31270 313 aaPredicted RBP16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 NPTX2P47972 431 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 RAB27AP51159 221 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 MAPK6Q16659 721 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 AMHR2Q16671 573 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 RESP18Q5W5W9 173 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 TWF2Q6IBS0 349 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 NOTUMQ6P988 496 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 ZNF689Q96CS4 500 aaPredicted RBP16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 CCDC51Q96ER9 411 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 REEP2Q9BRK0 252 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 PYM1Q9BRP8 204 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 NTPCRQ9BSD7 190 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 CCDC113Q9H0I3 377 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 FZD8Q9H461 694 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 CUEDC2Q9H467 287 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 ZNF576Q9H609 170 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 RC3H2Q9HBD1 1191 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 FAM13BQ9NYF5 915 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 LARSQ9P2J5 1176 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 PCDHB7Q9Y5E2 793 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 MYH11P35749 1972 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 TCHHQ07283 1943 aa16.29■□□□□ 0.2
CDC42BPB-209ENST00000634889 ADGRA3Q8IWK6 1321 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 CNTNAP2Q9UHC6 1331 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 EOMESO95936 686 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 ZNF131P52739 623 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 PEX3P56589 373 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 RAD51AP2Q09MP3 1159 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 DHX8Q14562 1220 aaKnown RBP16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 ADALQ6DHV7 355 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 SV2BQ7L1I2 683 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 ECHDC2Q86YB7 292 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 DEFB123Q8N688 67 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 PDILTQ8N807 584 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 IQUBQ8NA54 791 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 SPIRE2Q8WWL2 714 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 RSPH1Q8WYR4 309 aa16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 TTYH1Q9H313 450 aaPredicted RBP16.28■□□□□ 0.2
CDC42BPB-209ENST00000634889 CHD7Q9P2D1 2997 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 LCHNA4D1U4 455 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 CCDC169A6NNP5 214 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 H0YCG3 227 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 HOXA2O43364 376 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 ZNF623O75123 536 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 KRT18P05783 430 aaKnown RBP16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 ARF4P18085 180 aaPredicted RBP16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 SCP2P22307 547 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 CMA1P23946 247 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 SMTNP53814 917 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 TAP1Q03518 808 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 GIT2Q14161 759 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 E2F4Q16254 413 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 CMTR2Q8IYT2 770 aaKnown RBP16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 CHAMP1Q96JM3 812 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 KIFC3Q9BVG8 833 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms