RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 ADRB2P07550 413 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 GJA5P36382 358 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 DNAAF5Q86Y56 855 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 SLC17A8Q8NDX2 589 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 TRIM58Q8NG06 486 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 NTPCRQ9BSD7 190 aaKnown RBP21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 DNAJC12Q9UKB3 198 aa21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 MAFBQ9Y5Q3 323 aaPredicted RBP21.4■■□□□ 1.02
CHRNA4-209ENST00000627000 GFPT2O94808 682 aa21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 PRKCIP41743 596 aa21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 GPAT2Q6NUI2 795 aa21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 GPR161Q8N6U8 529 aaKnown RBP21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 MCPH1Q8NEM0 835 aa21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 LMO3Q8TAP4 145 aa21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 SPIRE2Q8WWL2 714 aa21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 SAAL1Q96ER3 474 aa21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 CCDC94Q9BW85 323 aaPredicted RBP21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 POLR3FQ9H1D9 316 aaPredicted RBP21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 TAF1DQ9H5J8 278 aaPredicted RBP21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 ATP6V0A4Q9HBG4 840 aa21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 ZNF446Q9NWS9 450 aa21.39■■□□□ 1.01
CHRNA4-209ENST00000627000 ANO9A1A5B4 782 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 FARP2O94887 1054 aaPredicted RBP21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 CNGA1P29973 690 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 GCLMP48507 274 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 SLC39A4Q6P5W5 647 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 CBWD2Q8IUF1 395 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 CAPZA3Q96KX2 299 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 FGD4Q96M96 766 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 EXOC7Q9UPT5 735 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 GSTTP1A0A1W2PQM5 241 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 CTAGE15A4D2H0 777 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 GLTPD2A6NH11 291 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 ZNF185O15231 689 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 CTAGE8P0CG41 777 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 KLRC1P26715 233 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 DRAP1Q14919 205 aaPredicted RBP21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 CTAGE6Q86UF2 777 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 CTAGE4Q8IX94 777 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 PCYT2Q99447 389 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 GPR88Q9GZN0 384 aa21.38■■□□□ 1.01
CHRNA4-209ENST00000627000 F8VZ95 297 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 TULP1O00294 542 aaPredicted RBP21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 OATP04181 439 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 SNRPFP62306 86 aaKnown RBP21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 PHLDB3Q6NSJ2 640 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 ARMC9Q7Z3E5 817 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 HVCN1Q96D96 273 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 MMS19Q96T76 1030 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 PARD6BQ9BYG5 372 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 C17orf75Q9HAS0 396 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 BZW2Q9Y6E2 419 aaKnown RBP21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 STAT1P42224 750 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 EMC2Q15006 297 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 LY6KQ17RY6 165 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 KIAA0753Q2KHM9 967 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 TAS1R3Q7RTX0 852 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 NOA1Q8NC60 698 aaKnown RBP21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 TMEM143Q96AN5 459 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 STK33Q9BYT3 514 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 APEX2Q9UBZ4 518 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 JRKLQ9Y4A0 524 aa21.37■■□□□ 1.01
CHRNA4-209ENST00000627000 IGKV6D-21A0A0A0MT36 114 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 SPDYE4A6NLX3 237 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 SOCS7O14512 581 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 EVI5O60447 810 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 SLC25A27O95847 323 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 SOX5P35711 763 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 POLGP54098 1239 aaPredicted RBP21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 NAP1L1P55209 391 aaKnown RBP21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 ANKZF1Q9H8Y5 726 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 NCK2O43639 380 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 ARIH2O95376 493 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 POTEJP0CG39 1038 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 NAB2Q15742 525 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 SNRNP35Q16560 246 aaKnown RBP21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 ARHGAP44Q17R89 818 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 FASTKD5Q7L8L6 764 aaKnown RBP21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 TXLNBQ8N3L3 684 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 ALS2CR12Q96Q35 445 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 LUC7LQ9NQ29 371 aaKnown RBP21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 NAGPAQ9UK23 515 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 USP20Q9Y2K6 914 aa21.36■■□□□ 1.01
CHRNA4-209ENST00000627000 MAPK13O15264 365 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 GGPS1O95749 300 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 FERP16591 822 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 OSBPP22059 807 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 RTP1P59025 263 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 LDLRAD1Q5T700 205 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 WDR78Q5VTH9 848 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 NOX5Q96PH1 765 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 SNX12Q9UMY4 172 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 MCM3APO60318 1980 aa21.35■■□□□ 1.01
CHRNA4-209ENST00000627000 PDE2AO00408 941 aaPredicted RBP21.34■■□□□ 1.01
CHRNA4-209ENST00000627000 EPC2Q52LR7 807 aa21.34■■□□□ 1.01
CHRNA4-209ENST00000627000 ARHGEF19Q8IW93 802 aa21.34■■□□□ 1.01
CHRNA4-209ENST00000627000 RNF10Q8N5U6 811 aaKnown RBP21.34■■□□□ 1.01
CHRNA4-209ENST00000627000 OLIG1Q8TAK6 271 aa21.34■■□□□ 1.01
CHRNA4-209ENST00000627000 CCDC127Q96BQ5 260 aa21.34■■□□□ 1.01
CHRNA4-209ENST00000627000 IFT74Q96LB3 600 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms