RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ANKRD27Q96NW4 1050 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 GORASP1Q9BQQ3 440 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 CARD9Q9H257 536 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 GCNT4Q9P109 453 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 SCOCQ9UIL1 159 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 ZBTB1Q9Y2K1 713 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 PCDHB13Q9Y5F0 798 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 ZC3H18Q86VM9 953 aaKnown RBP16.32■□□□□ 0.2
PMS1-221ENST00000624204 ANKLE1Q8NAG6 615 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 RDH13Q8NBN7 331 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 ZNF384Q8TF68 577 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 SCFD1Q8WVM8 642 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 RFFLQ8WZ73 363 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 DNAJC19Q96DA6 116 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 LRRC37BQ96QE4 947 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 FAM118BQ9BPY3 351 aa16.32■□□□□ 0.2
PMS1-221ENST00000624204 CDC42EP4Q9H3Q1 356 aaKnown RBP16.32■□□□□ 0.2
PMS1-221ENST00000624204 WFS1O76024 890 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 RARGP13631 454 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 ISLR2Q6UXK2 745 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 ARHGAP22Q7Z5H3 698 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 APBB1IPQ7Z5R6 666 aaPredicted RBP16.31■□□□□ 0.2
PMS1-221ENST00000624204 DTX3LQ8TDB6 740 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 KIAA1683Q9H0B3 1180 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 IKZF4Q9H2S9 585 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 BSDC1Q9NW68 430 aaPredicted RBP16.31■□□□□ 0.2
PMS1-221ENST00000624204 PARP2Q9UGN5 583 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 LRRN2O75325 713 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 CBX6O95503 412 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 STAT1P42224 750 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 LRRC23Q53EV4 343 aaPredicted RBP16.31■□□□□ 0.2
PMS1-221ENST00000624204 CGB2Q6NT52 195 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 MTHFD1LQ6UB35 978 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 ARHGEF26Q96DR7 871 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 PWWP2AQ96N64 755 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 CRAMP1Q96RY5 1269 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 POP1Q99575 1024 aaKnown RBP16.31■□□□□ 0.2
PMS1-221ENST00000624204 TBC1D10AQ9BXI6 508 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 FRMPD2Q68DX3 1309 aaPredicted RBP16.31■□□□□ 0.2
PMS1-221ENST00000624204 NVLO15381 856 aaKnown RBP16.31■□□□□ 0.2
PMS1-221ENST00000624204 PHF2O75151 1096 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 MARCKSL1P49006 195 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 TTC27Q6P3X3 843 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 GPBP1Q86WP2 473 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 COA7Q96BR5 231 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 RUNDC3BQ96NL0 473 aa16.31■□□□□ 0.2
PMS1-221ENST00000624204 MEIS1O00470 390 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 DNAJC3Q13217 504 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 SMIM5Q71RC9 77 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 PRELID2Q8N945 189 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 LRRC8CQ8TDW0 803 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 KIFAP3Q92845 792 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 NT5C3AQ9H0P0 336 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 PRKAG3Q9UGI9 489 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 KIAA1024Q9UPX6 916 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 USH1CQ9Y6N9 552 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 A0A0A6YYK5 440 aaPredicted RBP16.3■□□□□ 0.2
PMS1-221ENST00000624204 CAVIN4Q5BKX8 364 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 ZC3H12AQ5D1E8 599 aaKnown RBP16.3■□□□□ 0.2
PMS1-221ENST00000624204 DGKHQ86XP1 1220 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 AGGF1Q8N302 714 aaeCLIP16.3■□□□□ 0.2
PMS1-221ENST00000624204 PHC3Q8NDX5 983 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 LNX1Q8TBB1 728 aaPredicted RBP16.3■□□□□ 0.2
PMS1-221ENST00000624204 ASAP3Q8TDY4 903 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 KRT35Q92764 455 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 SLAIN2Q9P270 581 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 TTC7AQ9ULT0 858 aaPredicted RBP16.3■□□□□ 0.2
PMS1-221ENST00000624204 MYH3P11055 1940 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 BCORQ6W2J9 1755 aa16.3■□□□□ 0.2
PMS1-221ENST00000624204 GPR75-ASB3A0A0A6YYF3 556 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 ATP5DP30049 168 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 CHRNA3P32297 505 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 MECOMQ03112 1051 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 MTM1Q13496 603 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 LBRQ14739 615 aaKnown RBP16.29■□□□□ 0.2
PMS1-221ENST00000624204 MIGA2Q7L4E1 593 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 ZNF444Q8N0Y2 327 aaPredicted RBP16.29■□□□□ 0.2
PMS1-221ENST00000624204 PIGSQ96S52 555 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 THAP2Q9H0W7 228 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 TMX4Q9H1E5 349 aaPredicted RBP16.29■□□□□ 0.2
PMS1-221ENST00000624204 PICK1Q9NRD5 415 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 ASB3Q9Y575 518 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 GSTTP1A0A1W2PQM5 241 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 A0A1W2PRG0 241 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 WDR91A4D1P6 747 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 SFI1A8K8P3 1242 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 PODXLO00592 558 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 SKIV2L2P42285 1042 aaKnown RBP16.29■□□□□ 0.2
PMS1-221ENST00000624204 CTTNQ14247 550 aaKnown RBP16.29■□□□□ 0.2
PMS1-221ENST00000624204 ZNF746Q6NUN9 644 aaPredicted RBP16.29■□□□□ 0.2
PMS1-221ENST00000624204 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.29■□□□□ 0.2
PMS1-221ENST00000624204 DENND2DQ9H6A0 471 aaPredicted RBP16.29■□□□□ 0.2
PMS1-221ENST00000624204 PRDM11Q9NQV5 511 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 NMRK1Q9NWW6 199 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 CTTNBP2NLQ9P2B4 639 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 SPAG7O75391 227 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 PTGIRP43119 386 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 SERPINB4P48594 390 aa16.29■□□□□ 0.2
PMS1-221ENST00000624204 DRG2P55039 364 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms