RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 MBTD1Q05BQ5 628 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 CDCA2Q69YH5 1023 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-245ENST00000621399 RTN4RL1Q86UN2 441 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-245ENST00000621399 CEP57L1Q8IYX8 460 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 PHOSPHO2Q8TCD6 241 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 DDX12PQ92771 950 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 STAMQ92783 540 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 SLC9A7Q96T83 725 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 ADAM2Q99965 735 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 KIFC3Q9BVG8 833 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 TNMDQ9H2S6 317 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 LARSQ9P2J5 1176 aaKnown RBP20.52■□□□□ 0.88
CIRBP-245ENST00000621399 SIP14410 1827 aa20.52■□□□□ 0.88
CIRBP-245ENST00000621399 FAM237AA0A1B0GTK4 181 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 MGEA5O60502 916 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 ERLIN2O94905 339 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 SYKP43405 635 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 SMTNP53814 917 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 AMPD3Q01432 767 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 NCBP1Q09161 790 aaKnown RBP20.51■□□□□ 0.87
CIRBP-245ENST00000621399 PCBP1Q15365 356 aaKnown RBP eCLIP20.51■□□□□ 0.87
CIRBP-245ENST00000621399 MYOCDQ8IZQ8 938 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 MYCT1Q8N699 235 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 LINC01599Q8WXQ3 324 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 TSPYL2Q9H2G4 693 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-245ENST00000621399 MAGEF1Q9HAY2 307 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 KMT5AQ9NQR1 393 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 CHST12Q9NRB3 414 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 RGS18Q9NS28 235 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 KBTBD4Q9NVX7 518 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 SERTAD1Q9UHV2 236 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 PIN4Q9Y237 131 aaKnown RBP20.51■□□□□ 0.87
CIRBP-245ENST00000621399 TRIOBPQ9H2D6 2365 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 LOXHD1Q8IVV2 1947 aa20.51■□□□□ 0.87
CIRBP-245ENST00000621399 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-245ENST00000621399 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-245ENST00000621399 LIG1P18858 919 aa20.5■□□□□ 0.87
CIRBP-245ENST00000621399 FXR1P51114 621 aaKnown RBP eCLIP20.5■□□□□ 0.87
CIRBP-245ENST00000621399 EFNA5P52803 228 aa20.5■□□□□ 0.87
CIRBP-245ENST00000621399 DSC3Q14574 896 aa20.5■□□□□ 0.87
CIRBP-245ENST00000621399 LRIT3Q3SXY7 679 aa20.5■□□□□ 0.87
CIRBP-245ENST00000621399 FAM109BQ6ICB4 259 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-245ENST00000621399 SPIRE2Q8WWL2 714 aa20.5■□□□□ 0.87
CIRBP-245ENST00000621399 GOLPH3LQ9H4A5 285 aa20.5■□□□□ 0.87
CIRBP-245ENST00000621399 PARVGQ9HBI0 331 aa20.5■□□□□ 0.87
CIRBP-245ENST00000621399 PRMT7Q9NVM4 692 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-245ENST00000621399 USP25Q9UHP3 1055 aa20.5■□□□□ 0.87
CIRBP-245ENST00000621399 GRXCR1A8MXD5 290 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 SLC16A4O15374 487 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 TSPAN1O60635 241 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 SLFN14P0C7P3 912 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 IBSPP21815 317 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-245ENST00000621399 ZNF131P52739 623 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 MAPK6Q16659 721 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 LONRF3Q496Y0 759 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 SLC24A5Q71RS6 500 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 TMCO2Q7Z6W1 182 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-245ENST00000621399 HERC6Q8IVU3 1022 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 PIAS4Q8N2W9 510 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-245ENST00000621399 DNAJC19Q96DA6 116 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 NTPCRQ9BSD7 190 aaKnown RBP20.49■□□□□ 0.87
CIRBP-245ENST00000621399 ZBED2Q9BTP6 218 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 FZD8Q9H461 694 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 C1orf112Q9NSG2 853 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 AGPAT5Q9NUQ2 364 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 DACT1Q9NYF0 836 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 ADGRA3Q8IWK6 1321 aa20.49■□□□□ 0.87
CIRBP-245ENST00000621399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-245ENST00000621399 K7ERI5 159 aa20.48■□□□□ 0.87
CIRBP-245ENST00000621399 UPP2O95045 317 aa20.48■□□□□ 0.87
CIRBP-245ENST00000621399 IDEP14735 1019 aa20.48■□□□□ 0.87
CIRBP-245ENST00000621399 AFMP43652 599 aa20.48■□□□□ 0.87
CIRBP-245ENST00000621399 AMHR2Q16671 573 aa20.48■□□□□ 0.87
CIRBP-245ENST00000621399 FAM117BQ6P1L5 589 aa20.48■□□□□ 0.87
CIRBP-245ENST00000621399 TOP1MTQ969P6 601 aa20.48■□□□□ 0.87
CIRBP-245ENST00000621399 TCHHQ07283 1943 aa20.48■□□□□ 0.87
CIRBP-245ENST00000621399 B4GALT5O43286 388 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 ACTN4O43707 911 aaKnown RBP20.47■□□□□ 0.87
CIRBP-245ENST00000621399 TRAK2O60296 914 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 PRKCBP05771 671 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 AXLP30530 894 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 HOXA11P31270 313 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-245ENST00000621399 PRPF4BQ13523 1007 aaKnown RBP20.47■□□□□ 0.87
CIRBP-245ENST00000621399 TWF2Q6IBS0 349 aaKnown RBP20.47■□□□□ 0.87
CIRBP-245ENST00000621399 PPP4R3CPQ6ZMV5 832 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 TMEM87AQ8NBN3 555 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 PAGE5Q96GU1 130 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 PRIMPOLQ96LW4 560 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 TRIM9Q9C026 710 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 CCDC113Q9H0I3 377 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 ARHGAP28Q9P2N2 729 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 PHLPP2Q6ZVD8 1323 aa20.47■□□□□ 0.87
CIRBP-245ENST00000621399 C9IYK1 514 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 H0YCG3 227 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 ACKR2O00590 384 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 ZNF202O95125 648 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 STAG3L1P0CL83 205 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 GAP43P17677 238 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 SARSP49591 514 aaKnown RBP20.46■□□□□ 0.87
CIRBP-245ENST00000621399 RABGGTBP53611 331 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms