RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 KIF12Q96FN5 646 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 GCOM2Q9BZD3 368 aaPredicted RBP13.18□□□□□ -0.3
GTF2I-218ENST00000620879 COPB2P35606 906 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 SREBF1P36956 1147 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 YWHAGP61981 247 aaKnown RBP eCLIP13.18□□□□□ -0.3
GTF2I-218ENST00000620879 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
GTF2I-218ENST00000620879 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
GTF2I-218ENST00000620879 CAPN11Q9UMQ6 739 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 NFAT5O94916 1531 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 PRPSAP2O60256 369 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 PSMA2P25787 234 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 BASP1P80723 227 aaKnown RBP13.18□□□□□ -0.3
GTF2I-218ENST00000620879 NR1I3Q14994 352 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 SNRNP35Q16560 246 aaKnown RBP13.18□□□□□ -0.3
GTF2I-218ENST00000620879 C10orf76Q5T2E6 689 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 RHOT2Q8IXI1 618 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 KCTD6Q8NC69 237 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 CCDC110Q8TBZ0 833 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 SMARCAD1Q9H4L7 1026 aa13.18□□□□□ -0.3
GTF2I-218ENST00000620879 PIN4Q9Y237 131 aaKnown RBP13.18□□□□□ -0.3
GTF2I-218ENST00000620879 PIK3C2AO00443 1686 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 PLS3P13797 630 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 GNA15P30679 374 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 SLCO1A2P46721 670 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 MFSD14CQ5VZR4 134 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 TAOK1Q7L7X3 1001 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
GTF2I-218ENST00000620879 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
GTF2I-218ENST00000620879 NUDT12Q9BQG2 462 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 TRIM10Q9UDY6 481 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 HUS1O60921 280 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
GTF2I-218ENST00000620879 UCHL3P15374 230 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 PSMC6P62333 389 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 GPC5P78333 572 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
GTF2I-218ENST00000620879 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 ARMCX2Q7L311 632 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 SLC51AQ86UW1 340 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 SYTL5Q8TDW5 730 aaPredicted RBP13.17□□□□□ -0.3
GTF2I-218ENST00000620879 PDCD2LQ9BRP1 358 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 TFR2Q9UP52 801 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 ZRANB2O95218 330 aaKnown RBP eCLIP13.17□□□□□ -0.3
GTF2I-218ENST00000620879 SLC25A27O95847 323 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 RWDD2BP57060 319 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 DHX9Q08211 1270 aaKnown RBP13.17□□□□□ -0.3
GTF2I-218ENST00000620879 PDXDC1Q6P996 788 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 SYT2Q8N9I0 419 aaPredicted RBP13.17□□□□□ -0.3
GTF2I-218ENST00000620879 SLC30A5Q8TAD4 765 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 HSPH1Q92598 858 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 GPBP1L1Q9HC44 474 aaPredicted RBP13.17□□□□□ -0.3
GTF2I-218ENST00000620879 GAKO14976 1311 aa13.17□□□□□ -0.3
GTF2I-218ENST00000620879 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 ECEL1O95672 775 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 CETPP11597 493 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 IFNAR2P48551 515 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 FMO5P49326 533 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 SETDB1Q15047 1291 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 GNASQ5JWF2 1037 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 KCNV1Q6PIU1 500 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 RAD9BQ6WBX8 426 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 TC2NQ8N9U0 490 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 RAET1EQ8TD07 263 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 CABS1Q96KC9 395 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 PIK3R2O00459 728 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 GYPCP04921 128 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 TCF7P36402 384 aaPredicted RBP13.16□□□□□ -0.3
GTF2I-218ENST00000620879 EFNA5P52803 228 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 CCZ1BP86790 482 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 CCZ1P86791 482 aaPredicted RBP13.16□□□□□ -0.3
GTF2I-218ENST00000620879 LGSNQ5TDP6 509 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 FBXO38Q6PIJ6 1188 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 CEP57Q86XR8 500 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 FBXL16Q8N461 479 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 TBC1D31Q96DN5 1066 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 SMC6Q96SB8 1091 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 PI4K2AQ9BTU6 479 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 FNDC3AQ9Y2H6 1198 aaKnown RBP13.16□□□□□ -0.3
GTF2I-218ENST00000620879 STX2P32856 288 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 ARL4AP40617 200 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 CLCN6P51797 869 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 C6orf163Q5TEZ5 329 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 PDZD4Q76G19 769 aaPredicted RBP13.16□□□□□ -0.3
GTF2I-218ENST00000620879 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
GTF2I-218ENST00000620879 EPC2Q52LR7 807 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
GTF2I-218ENST00000620879 PBKQ96KB5 322 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 DDX47Q9H0S4 455 aaKnown RBP13.16□□□□□ -0.3
GTF2I-218ENST00000620879 KBTBD4Q9NVX7 518 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 NFU1Q9UMS0 254 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 SNX24Q9Y343 169 aa13.16□□□□□ -0.3
GTF2I-218ENST00000620879 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
GTF2I-218ENST00000620879 MAFGO15525 162 aa13.15□□□□□ -0.3
GTF2I-218ENST00000620879 GH1P01241 217 aa13.15□□□□□ -0.3
GTF2I-218ENST00000620879 EFCAB12Q6NXP0 572 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms