RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
LITAF-220ENST00000620789 ERLIN2O94905 339 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 STAG3L1P0CL83 205 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 RAD51AP2Q09MP3 1159 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 DHX8Q14562 1220 aaKnown RBP20.22■□□□□ 0.83
LITAF-220ENST00000620789 ARSHQ5FYA8 562 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 SHC4Q6S5L8 630 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 CCDC73Q6ZRK6 1079 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 GPBP1Q86WP2 473 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 ZBTB8OSQ8IWT0 167 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 LEO1Q8WVC0 666 aaPredicted RBP20.22■□□□□ 0.83
LITAF-220ENST00000620789 SPATA32Q96LK8 384 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 YME1L1Q96TA2 773 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 C2orf40Q9H1Z8 148 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 TTYH1Q9H313 450 aaPredicted RBP20.22■□□□□ 0.83
LITAF-220ENST00000620789 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
LITAF-220ENST00000620789 DACT1Q9NYF0 836 aa20.22■□□□□ 0.83
LITAF-220ENST00000620789 A0A087X0B3 334 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 LCHNA4D1U4 455 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 FAM189BP81408 668 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 NAALADL2Q58DX5 795 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 PPP2R2DQ66LE6 453 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 Q7L0L9 218 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 DEFB123Q8N688 67 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 DEPTORQ8TB45 409 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 PANK2Q9BZ23 570 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 ZNF576Q9H609 170 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 C17orf75Q9HAS0 396 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 LRFN2Q9ULH4 789 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 COL4A6Q14031 1691 aa20.21■□□□□ 0.83
LITAF-220ENST00000620789 NPHP3-ACAD11A0A0J9YXS1 232 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 TSPAN1O60635 241 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 IBSPP21815 317 aaPredicted RBP20.2■□□□□ 0.82
LITAF-220ENST00000620789 HOXA11P31270 313 aaPredicted RBP20.2■□□□□ 0.82
LITAF-220ENST00000620789 STAT6P42226 847 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 AMHR2Q16671 573 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 TWF2Q6IBS0 349 aaKnown RBP20.2■□□□□ 0.82
LITAF-220ENST00000620789 PDILTQ8N807 584 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 SP7Q8TDD2 431 aaPredicted RBP20.2■□□□□ 0.82
LITAF-220ENST00000620789 TRAIPQ9BWF2 469 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 SCAND2PQ9GZW5 306 aaPredicted RBP20.2■□□□□ 0.82
LITAF-220ENST00000620789 SEMA6BQ9H3T3 888 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 ELAC1Q9H777 363 aaKnown RBP20.2■□□□□ 0.82
LITAF-220ENST00000620789 RC3H2Q9HBD1 1191 aaKnown RBP20.2■□□□□ 0.82
LITAF-220ENST00000620789 TMEM161AQ9NX61 479 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 ODF2LQ9ULJ1 636 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 PCDHB7Q9Y5E2 793 aa20.2■□□□□ 0.82
LITAF-220ENST00000620789 A0A0U1RQF3 1178 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 DGKIO75912 1065 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 ARHGEF15O94989 841 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 AXLP30530 894 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 NPTX2P47972 431 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 PEX3P56589 373 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 CACNB1Q02641 598 aaPredicted RBP20.19■□□□□ 0.82
LITAF-220ENST00000620789 TAP1Q03518 808 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
LITAF-220ENST00000620789 DMP1Q13316 513 aaPredicted RBP20.19■□□□□ 0.82
LITAF-220ENST00000620789 RESP18Q5W5W9 173 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 ECHDC2Q86YB7 292 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 ZNF689Q96CS4 500 aaPredicted RBP20.19■□□□□ 0.82
LITAF-220ENST00000620789 PRIMPOLQ96LW4 560 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 REEP2Q9BRK0 252 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 KIFC3Q9BVG8 833 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 FZD8Q9H461 694 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 PRMT7Q9NVM4 692 aaPredicted RBP20.19■□□□□ 0.82
LITAF-220ENST00000620789 CIZ1Q9ULV3 898 aaPredicted RBP20.19■□□□□ 0.82
LITAF-220ENST00000620789 CDH23Q9H251 3354 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 ADGRA3Q8IWK6 1321 aa20.19■□□□□ 0.82
LITAF-220ENST00000620789 LINC01553A4QN01 128 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 CCDC169A6NNP5 214 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 SFI1A8K8P3 1242 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 KRT18P05783 430 aaKnown RBP20.18■□□□□ 0.82
LITAF-220ENST00000620789 PLS3P13797 630 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 EFNA5P52803 228 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 GIT2Q14161 759 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 FAM187BQ17R55 369 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 SV2BQ7L1I2 683 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 FAM161BQ96MY7 647 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 CCDC113Q9H0I3 377 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 FAM13BQ9NYF5 915 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 CHD7Q9P2D1 2997 aa20.18■□□□□ 0.82
LITAF-220ENST00000620789 TCHHQ07283 1943 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 B4GALT5O43286 388 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 SKIP12755 728 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 ARF4P18085 180 aaPredicted RBP20.17■□□□□ 0.82
LITAF-220ENST00000620789 RAB27AP51159 221 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 E2F4Q16254 413 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 MAPK6Q16659 721 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 NOTUMQ6P988 496 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 SPIRE2Q8WWL2 714 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 CCDC51Q96ER9 411 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 CPB2Q96IY4 423 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 NTPCRQ9BSD7 190 aaKnown RBP20.17■□□□□ 0.82
LITAF-220ENST00000620789 KMT5AQ9NQR1 393 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 FAM105AQ9NUU6 356 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 LARSQ9P2J5 1176 aaKnown RBP20.17■□□□□ 0.82
LITAF-220ENST00000620789 ARHGAP28Q9P2N2 729 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 KCNG1Q9UIX4 513 aa20.17■□□□□ 0.82
LITAF-220ENST00000620789 CNTNAP2Q9UHC6 1331 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms