RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 HOOK1Q9UJC3 728 aaKnown RBP25.02■■□□□ 1.6
CBWD3-213ENST00000618217 ZMYND8Q9ULU4 1186 aaPredicted RBP25.02■■□□□ 1.6
CBWD3-213ENST00000618217 NOC2LQ9Y3T9 749 aaKnown RBP25.02■■□□□ 1.6
CBWD3-213ENST00000618217 PCDHA5Q9Y5H7 936 aa25.02■■□□□ 1.6
CBWD3-213ENST00000618217 SLC16A4O15374 487 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 RPN1P04843 607 aaKnown RBP25.01■■□□□ 1.59
CBWD3-213ENST00000618217 SARSP49591 514 aaKnown RBP25.01■■□□□ 1.59
CBWD3-213ENST00000618217 CAMK4Q16566 473 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 SRGAP1Q7Z6B7 1085 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 USP38Q8NB14 1042 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 DEPTORQ8TB45 409 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 HPS3Q969F9 1004 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 CCDC113Q9H0I3 377 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 NR2E3Q9Y5X4 410 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 CEP290O15078 2479 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 CXCL10P02778 98 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 MAPTP10636 758 aaKnown RBP25.01■■□□□ 1.59
CBWD3-213ENST00000618217 GHRP10912 638 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 PTMSP20962 102 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 SMTNP53814 917 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 MBTD1Q05BQ5 628 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 NFKBIBQ15653 356 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 KMT5BQ4FZB7 885 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 NT5DC1Q5TFE4 455 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 FAM178BQ8IXR5 827 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 STRA6Q9BX79 667 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 FGFBP2Q9BYJ0 223 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 ST6GALNAC4Q9H4F1 302 aa25.01■■□□□ 1.59
CBWD3-213ENST00000618217 NMT1P30419 496 aaKnown RBP25■■□□□ 1.59
CBWD3-213ENST00000618217 RFC2P35250 354 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 EFNA5P52803 228 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 TSHZ1Q6ZSZ6 1077 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 TAS1R3Q7RTX0 852 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 ZNF720Q7Z2F6 126 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 FAM228AQ86W67 206 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 BADQ92934 168 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 C2orf40Q9H1Z8 148 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 FZD8Q9H461 694 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 TBC1D7Q9P0N9 293 aa25■■□□□ 1.59
CBWD3-213ENST00000618217 RHOBTB3O94955 611 aa24.99■■□□□ 1.59
CBWD3-213ENST00000618217 CSF2RAP15509 400 aa24.99■■□□□ 1.59
CBWD3-213ENST00000618217 KCNB1Q14721 858 aa24.99■■□□□ 1.59
CBWD3-213ENST00000618217 HAUS6Q7Z4H7 955 aa24.99■■□□□ 1.59
CBWD3-213ENST00000618217 TMEM199Q8N511 208 aa24.99■■□□□ 1.59
CBWD3-213ENST00000618217 GSDMAQ96QA5 445 aa24.99■■□□□ 1.59
CBWD3-213ENST00000618217 INO80BQ9C086 356 aaPredicted RBP24.99■■□□□ 1.59
CBWD3-213ENST00000618217 NUP62CLQ9H1M0 184 aa24.99■■□□□ 1.59
CBWD3-213ENST00000618217 TMEM134Q9H6X4 195 aa24.99■■□□□ 1.59
CBWD3-213ENST00000618217 PPP1R37O75864 691 aa24.98■■□□□ 1.59
CBWD3-213ENST00000618217 CASP5P51878 434 aa24.98■■□□□ 1.59
CBWD3-213ENST00000618217 AMHR2Q16671 573 aa24.98■■□□□ 1.59
CBWD3-213ENST00000618217 PLEKHG4Q58EX7 1191 aa24.98■■□□□ 1.59
CBWD3-213ENST00000618217 ZBTB8OSQ8IWT0 167 aa24.98■■□□□ 1.59
CBWD3-213ENST00000618217 GLIS3Q8NEA6 775 aa24.98■■□□□ 1.59
CBWD3-213ENST00000618217 MRPL44Q9H9J2 332 aaKnown RBP24.98■■□□□ 1.59
CBWD3-213ENST00000618217 ERVK-5Q9HDB9 667 aa24.98■■□□□ 1.59
CBWD3-213ENST00000618217 PADI3Q9ULW8 664 aa24.98■■□□□ 1.59
CBWD3-213ENST00000618217 PDE4DIPQ5VU43 2346 aa24.98■■□□□ 1.59
CBWD3-213ENST00000618217 INO80B-WBP1J3KQ70 363 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 RPS6KA5O75582 802 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 SMC2O95347 1197 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 FGFR4P22455 802 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 CD52P31358 61 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 GTF2BQ00403 316 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 FAM187BQ17R55 369 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 KLHL40Q2TBA0 621 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 FAM26FQ5R3K3 315 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 SLC17A8Q8NDX2 589 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 KIAA1468Q9P260 1216 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 ST3GAL5Q9UNP4 418 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 DENND3A2RUS2 1198 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 K7ERI5 159 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 SCP2P22307 547 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 STK4Q13043 487 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 PSMD2Q13200 908 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 PCBP1Q15365 356 aaKnown RBP eCLIP24.97■■□□□ 1.59
CBWD3-213ENST00000618217 ZC2HC1CQ53FD0 456 aaPredicted RBP24.97■■□□□ 1.59
CBWD3-213ENST00000618217 EPM2AIP1Q7L775 607 aaPredicted RBP24.97■■□□□ 1.59
CBWD3-213ENST00000618217 SMARCE1Q969G3 411 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 EXOC1Q9NV70 894 aa24.97■■□□□ 1.59
CBWD3-213ENST00000618217 H0YCG3 227 aa24.96■■□□□ 1.59
CBWD3-213ENST00000618217 K7ENM7 598 aa24.96■■□□□ 1.59
CBWD3-213ENST00000618217 EDN1P05305 212 aa24.96■■□□□ 1.59
CBWD3-213ENST00000618217 TCTN1Q2MV58 587 aa24.96■■□□□ 1.59
CBWD3-213ENST00000618217 PPP4R3CPQ6ZMV5 832 aa24.96■■□□□ 1.59
CBWD3-213ENST00000618217 C16orf59Q7L2K0 433 aa24.96■■□□□ 1.59
CBWD3-213ENST00000618217 DEFB128Q7Z7B8 93 aa24.96■■□□□ 1.59
CBWD3-213ENST00000618217 IFIH1Q9BYX4 1025 aaKnown RBP24.96■■□□□ 1.59
CBWD3-213ENST00000618217 PHLPP2Q6ZVD8 1323 aa24.95■■□□□ 1.59
CBWD3-213ENST00000618217 TTLL13PA6NNM8 815 aa24.95■■□□□ 1.58
CBWD3-213ENST00000618217 GPR182O15218 404 aa24.95■■□□□ 1.58
CBWD3-213ENST00000618217 MYBP10242 640 aa24.95■■□□□ 1.58
CBWD3-213ENST00000618217 SFPQP23246 707 aaKnown RBP eCLIP24.95■■□□□ 1.58
CBWD3-213ENST00000618217 MAPK6Q16659 721 aa24.95■■□□□ 1.58
CBWD3-213ENST00000618217 KIAA0895Q8NCT3 520 aa24.95■■□□□ 1.58
CBWD3-213ENST00000618217 DBF4BQ8NFT6 615 aa24.95■■□□□ 1.58
CBWD3-213ENST00000618217 TMX1Q9H3N1 280 aa24.95■■□□□ 1.58
CBWD3-213ENST00000618217 SLC39A2Q9NP94 309 aa24.95■■□□□ 1.58
CBWD3-213ENST00000618217 PRMT7Q9NVM4 692 aaPredicted RBP24.95■■□□□ 1.58
CBWD3-213ENST00000618217 TMEM63CQ9P1W3 806 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms