RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 RAD54LQ92698 747 aa15.74■□□□□ 0.11
TUBE1-211ENST00000605457 CHAMP1Q96JM3 812 aa15.74■□□□□ 0.11
TUBE1-211ENST00000605457 ZNF576Q9H609 170 aa15.74■□□□□ 0.11
TUBE1-211ENST00000605457 POLD4Q9HCU8 107 aa15.74■□□□□ 0.11
TUBE1-211ENST00000605457 CHST12Q9NRB3 414 aa15.74■□□□□ 0.11
TUBE1-211ENST00000605457 KCND2Q9NZV8 630 aa15.74■□□□□ 0.11
TUBE1-211ENST00000605457 PIN4Q9Y237 131 aaKnown RBP15.74■□□□□ 0.11
TUBE1-211ENST00000605457 INO80B-WBP1J3KQ70 363 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 CUTAO60888 179 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 HIP1RO75146 1068 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 NAMPTP43490 491 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 PPP2R5AQ15172 486 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 PCBP1Q15365 356 aaKnown RBP eCLIP15.73■□□□□ 0.11
TUBE1-211ENST00000605457 AXDND1Q5T1B0 1012 aaPredicted RBP15.73■□□□□ 0.11
TUBE1-211ENST00000605457 YME1L1Q96TA2 773 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 TIPINQ9BVW5 301 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 SEMA6BQ9H3T3 888 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 CCDC39Q9UFE4 941 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 RCOR1Q9UKL0 485 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 ATP6V1DQ9Y5K8 247 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 ADGRA3Q8IWK6 1321 aa15.73■□□□□ 0.11
TUBE1-211ENST00000605457 A0A087X0B3 334 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 DGKIO75912 1065 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 ERLIN2O94905 339 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 STAG3L1P0CL83 205 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 HOXA11P31270 313 aaPredicted RBP15.72■□□□□ 0.11
TUBE1-211ENST00000605457 KRT85P78386 507 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 NUCB2P80303 420 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 FAM189BP81408 668 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 TAP1Q03518 808 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 MCM6Q14566 821 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 AMHR2Q16671 573 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 NAALADL2Q58DX5 795 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 ARSHQ5FYA8 562 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 DRC1Q96MC2 740 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 FAM161BQ96MY7 647 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 TRAIPQ9BWF2 469 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 DACT1Q9NYF0 836 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 A0A0U1RQF3 1178 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 TSPAN1O60635 241 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 ANP32AP39687 249 aaKnown RBP15.72■□□□□ 0.11
TUBE1-211ENST00000605457 ME1P48163 572 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 RAD51AP2Q09MP3 1159 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 SHC4Q6S5L8 630 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 GPBP1Q86WP2 473 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 ZNF689Q96CS4 500 aaPredicted RBP15.72■□□□□ 0.11
TUBE1-211ENST00000605457 IFT74Q96LB3 600 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 C2orf40Q9H1Z8 148 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 ELAC1Q9H777 363 aaKnown RBP15.72■□□□□ 0.11
TUBE1-211ENST00000605457 TMEM161AQ9NX61 479 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 MTMR10Q9NXD2 777 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 PCDHA7Q9UN72 937 aa15.72■□□□□ 0.11
TUBE1-211ENST00000605457 TRIP11Q15643 1979 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 TDRD15B5MCY1 1934 aaKnown RBP15.71■□□□□ 0.11
TUBE1-211ENST00000605457 LINC01553A4QN01 128 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 ATF7P17544 494 aaPredicted RBP15.71■□□□□ 0.11
TUBE1-211ENST00000605457 NCLP19338 710 aaKnown RBP15.71■□□□□ 0.11
TUBE1-211ENST00000605457 DHX8Q14562 1220 aaKnown RBP15.71■□□□□ 0.11
TUBE1-211ENST00000605457 RRAGBQ5VZM2 374 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 TWF2Q6IBS0 349 aaKnown RBP15.71■□□□□ 0.11
TUBE1-211ENST00000605457 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 CCDC73Q6ZRK6 1079 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 SPRED2Q7Z698 418 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 ECHDC2Q86YB7 292 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 ZBTB8OSQ8IWT0 167 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 DEPTORQ8TB45 409 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 LEO1Q8WVC0 666 aaPredicted RBP15.71■□□□□ 0.11
TUBE1-211ENST00000605457 KIFC3Q9BVG8 833 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 CCDC113Q9H0I3 377 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 C17orf75Q9HAS0 396 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
TUBE1-211ENST00000605457 LRFN2Q9ULH4 789 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 PCDHB7Q9Y5E2 793 aa15.71■□□□□ 0.11
TUBE1-211ENST00000605457 ATG2AQ2TAZ0 1938 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 PRRC2BQ5JSZ5 2229 aaKnown RBP15.7■□□□□ 0.1
TUBE1-211ENST00000605457 NPHP3-ACAD11A0A0J9YXS1 232 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 IBSPP21815 317 aaPredicted RBP15.7■□□□□ 0.1
TUBE1-211ENST00000605457 NPTX2P47972 431 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 PEX3P56589 373 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 DMP1Q13316 513 aaPredicted RBP15.7■□□□□ 0.1
TUBE1-211ENST00000605457 GRIN2CQ14957 1233 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 FAM187BQ17R55 369 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 ZNF598Q86UK7 904 aaKnown RBP15.7■□□□□ 0.1
TUBE1-211ENST00000605457 PDILTQ8N807 584 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 SPATA32Q96LK8 384 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 PRIMPOLQ96LW4 560 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 GUCD1Q96NT3 240 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 REEP2Q9BRK0 252 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 FZD8Q9H461 694 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 FAM105AQ9NUU6 356 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 PRMT7Q9NVM4 692 aaPredicted RBP15.7■□□□□ 0.1
TUBE1-211ENST00000605457 ODF2LQ9ULJ1 636 aa15.7■□□□□ 0.1
TUBE1-211ENST00000605457 SFI1A8K8P3 1242 aa15.69■□□□□ 0.1
TUBE1-211ENST00000605457 B4GALT5O43286 388 aa15.69■□□□□ 0.1
TUBE1-211ENST00000605457 ARF4P18085 180 aaPredicted RBP15.69■□□□□ 0.1
TUBE1-211ENST00000605457 AXLP30530 894 aa15.69■□□□□ 0.1
TUBE1-211ENST00000605457 STAT6P42226 847 aa15.69■□□□□ 0.1
TUBE1-211ENST00000605457 GATMP50440 423 aa15.69■□□□□ 0.1
TUBE1-211ENST00000605457 RAB27AP51159 221 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms