RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 THAP9Q9H5L6 903 aa11.34□□□□□ -0.59
DDX55P1-201ENST00000603334 PRDM5Q9NQX1 630 aaPredicted RBP11.34□□□□□ -0.59
DDX55P1-201ENST00000603334 CYP26B1Q9NR63 512 aa11.34□□□□□ -0.59
DDX55P1-201ENST00000603334 LARSQ9P2J5 1176 aaKnown RBP11.34□□□□□ -0.59
DDX55P1-201ENST00000603334 SEL1LQ9UBV2 794 aa11.34□□□□□ -0.59
DDX55P1-201ENST00000603334 MAFBQ9Y5Q3 323 aaPredicted RBP11.34□□□□□ -0.59
DDX55P1-201ENST00000603334 PRUNE2Q8WUY3 3088 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 NRCAMQ92823 1304 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 IGSF9BQ9UPX0 1349 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 CCDC169A6NNP5 214 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 K7ENM7 598 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 CALUO43852 315 aaPredicted RBP11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 CAND2O75155 1236 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 STBD1O95210 358 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 PARNO95453 639 aaKnown RBP11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 TIMP1P01033 207 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 ZNF286BP0CG31 522 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 MARK3P27448 753 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 CDC25BP30305 580 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 MTIF2P46199 727 aaKnown RBP11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 POLGP54098 1239 aaPredicted RBP11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 RBL2Q08999 1139 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 C9orf50Q5SZB4 431 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 TTI2Q6NXR4 508 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 TMC6Q7Z403 805 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 SYCP3Q8IZU3 236 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 CAGE1Q8TC20 777 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 MRFAP1L1Q96HT8 127 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 FAM167AQ96KS9 214 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 CTAGE1Q96RT6 745 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 PCYT2Q99447 389 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 DUSP9Q99956 384 aaKnown RBP11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 FGFBP2Q9BYJ0 223 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 VPS16Q9H269 839 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 ATP6V0A4Q9HBG4 840 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 PCDHA2Q9Y5H9 948 aa11.33□□□□□ -0.6
DDX55P1-201ENST00000603334 CHD9Q3L8U1 2897 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 RRN3P2A6NIE6 340 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 B4GALT4O60513 344 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 DGAT1O75907 488 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 PLS3P13797 630 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 RAG1P15918 1043 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 ZNF18P17022 549 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 ATP4AP20648 1035 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 SMTNP53814 917 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 PEX3P56589 373 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 LRRC63Q05C16 580 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 PTK7Q13308 1070 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 BFSP2Q13515 415 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 PTGISQ16647 500 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 ZC2HC1CQ53FD0 456 aaPredicted RBP11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 TCP11X2Q5H9J9 407 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 FAM47CQ5HY64 1035 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 FAM43BQ6ZT52 329 aaPredicted RBP11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 TMEM199Q8N511 208 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 MCPH1Q8NEM0 835 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 ZNF507Q8TCN5 953 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 SCFD1Q8WVM8 642 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 KIFAP3Q92845 792 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 IFT74Q96LB3 600 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 NAP1L5Q96NT1 182 aaPredicted RBP11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 GPRC5CQ9NQ84 441 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 TAB2Q9NYJ8 693 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 HDAC6Q9UBN7 1215 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 TRPC6Q9Y210 931 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 NOD1Q9Y239 953 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 SCN5AQ14524 2016 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 TANC1Q9C0D5 1861 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 CHD7Q9P2D1 2997 aa11.32□□□□□ -0.6
DDX55P1-201ENST00000603334 REV3LO60673 3130 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 GBF1Q92538 1859 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 C17orf102A2RUQ5 167 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 N4BP3O15049 544 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 CETN3O15182 167 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 SMIM10L2AP0DMW4 78 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 SMIM10L2BP0DMW5 78 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 PRKCSHP14314 528 aaPredicted RBP11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 RFC2P35250 354 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 CASP5P51878 434 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 CHMP4BP1P59074 171 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 MAPK7Q13164 816 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 ADAM9Q13443 819 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 KRT31Q15323 416 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 SHHQ15465 462 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 CCDC40Q4G0X9 1142 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 CDKAL1Q5VV42 579 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 MFSD5Q6N075 450 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 ZNF720Q7Z2F6 126 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 FILIP1Q7Z7B0 1213 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 RPAINQ86UA6 219 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 KSR1Q8IVT5 923 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 VWCEQ96DN2 955 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 EEF2KMTQ96G04 330 aa11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 NIFKQ9BYG3 293 aaKnown RBP11.31□□□□□ -0.6
DDX55P1-201ENST00000603334 TRPV6Q9H1D0 765 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms