RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SMIM10L2AP0DMW4 78 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 SMIM10L2BP0DMW5 78 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 PURAQ00577 322 aaKnown RBP19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 MFSD10Q14728 455 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 ZNF484Q5JVG2 852 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 LINC01465Q8N7H1 131 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 KIF18AQ8NI77 898 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 LMBR1Q8WVP7 490 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 PPP1R13BQ96KQ4 1090 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 PPP1R16BQ96T49 567 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 LIMA1Q9UHB6 759 aaKnown RBP19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 PCDHB13Q9Y5F0 798 aa19.03■□□□□ 0.64
PPFIA3-207ENST00000602716 PDXKO00764 312 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 NR3C1P04150 777 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 NR2F2P24468 414 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 KLRC1P26715 233 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 CBX1P83916 185 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 MAP2K1Q02750 393 aaPredicted RBP19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 EFCAB12Q6NXP0 572 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 METTL13Q8N6R0 699 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 IFT74Q96LB3 600 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 VPS16Q9H269 839 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 C17orf75Q9HAS0 396 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 AGPAT3Q9NRZ7 376 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 WBP1LQ9NX94 342 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 PPME1Q9Y570 386 aa19.02■□□□□ 0.64
PPFIA3-207ENST00000602716 A0A1B0GTH6 734 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 HAS3O00219 553 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 CBFA2T2O43439 604 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 RARBP10826 455 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 CASP4P49662 377 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 PSEN2P49810 448 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 COPB1P53618 953 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 EDRF1Q3B7T1 1238 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 SLC39A4Q6P5W5 647 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 FOXR2Q6PJQ5 311 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 MAP4K3Q8IVH8 894 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 ZSWIM2Q8NEG5 633 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 NTPCRQ9BSD7 190 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 XPNPEP3Q9NQH7 507 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 CGNQ9P2M7 1197 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 TBX20Q9UMR3 447 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 GNRH1P01148 92 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 FKBP3Q00688 224 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 LAMTOR4Q0VGL1 99 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 PXYLP1Q8TE99 480 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 NOC3LQ8WTT2 800 aaKnown RBP19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 ACCSQ96QU6 501 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 GBP3Q9H0R5 595 aa19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 SUCLA2Q9P2R7 463 aaPredicted RBP19.01■□□□□ 0.63
PPFIA3-207ENST00000602716 COL1A2P08123 1366 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 ANKRD63C9JTQ0 380 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 NRDCO43847 1150 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 MYCNP04198 464 aaPredicted RBP19■□□□□ 0.63
PPFIA3-207ENST00000602716 NAMPTP43490 491 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 SMTNP53814 917 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 ZNF200P98182 395 aaPredicted RBP19■□□□□ 0.63
PPFIA3-207ENST00000602716 GNASQ5JWF2 1037 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 MTHFD1LQ6UB35 978 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 CXCL17Q6UXB2 119 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 PPP4R3CPQ6ZMV5 832 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 STXBP4Q6ZWJ1 553 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 RHPN2Q8IUC4 686 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 SYCP3Q8IZU3 236 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 SH3TC2Q8TF17 1288 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 PSPC1Q8WXF1 523 aaKnown RBP19■□□□□ 0.63
PPFIA3-207ENST00000602716 CBWD1Q9BRT8 395 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 TTLL13PA6NNM8 815 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 AKAP3O75969 853 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 EEF1GP26641 437 aaKnown RBP19■□□□□ 0.63
PPFIA3-207ENST00000602716 CYP2J2P51589 502 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 ADAM9Q13443 819 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 ALCAMQ13740 583 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 IER5Q5VY09 327 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 DNAJC5GQ8N7S2 189 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 BEGAINQ9BUH8 593 aa19■□□□□ 0.63
PPFIA3-207ENST00000602716 CALUO43852 315 aaPredicted RBP18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 VTNP04004 478 aa18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 SPAG1Q07617 926 aa18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 MIIPQ5JXC2 388 aa18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 RUFY4Q6ZNE9 571 aa18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 RNF149Q8NC42 400 aa18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 DEPTORQ8TB45 409 aa18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 NLRP4Q96MN2 994 aa18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 DDX20Q9UHI6 824 aaKnown RBP18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 SIP14410 1827 aa18.99■□□□□ 0.63
PPFIA3-207ENST00000602716 SPDYE4A6NLX3 237 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 GAS2O43903 313 aaKnown RBP18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 SRGAP2CP0DJJ0 459 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 GRK4P32298 578 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 NR1I3Q14994 352 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 VSTM4Q8IW00 320 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 SLAIN1Q8ND83 568 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 CEP63Q96MT8 703 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 TUBGCP2Q9BSJ2 902 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 PCIF1Q9H4Z3 704 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 MAGEC2Q9UBF1 373 aaPredicted RBP18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 LRRC10BA6NIK2 292 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 ADSSP30520 456 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 MTIF2P46199 727 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms