RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 IFT74Q96LB3 600 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 C17orf80Q9BSJ5 609 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 AGPAT5Q9NUQ2 364 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 TMEM161AQ9NX61 479 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 STXBP5LQ9Y2K9 1186 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 SRPRBQ9Y5M8 271 aaKnown RBP14.18□□□□□ -0.14
USE1-209ENST00000601592 CDH23Q9H251 3354 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 CHD7Q9P2D1 2997 aa14.18□□□□□ -0.14
USE1-209ENST00000601592 EPOPA6NHQ4 379 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 TBKBP1A7MCY6 615 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 SLC26A4O43511 780 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 HIP1RO75146 1068 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 FGFR1P11362 822 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 CTNNB1P35222 781 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 NASPP49321 788 aaPredicted RBP14.17□□□□□ -0.14
USE1-209ENST00000601592 MBTD1Q05BQ5 628 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 NCBP1Q09161 790 aaKnown RBP14.17□□□□□ -0.14
USE1-209ENST00000601592 LONRF3Q496Y0 759 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 SPOUT1Q5T280 376 aaKnown RBP14.17□□□□□ -0.14
USE1-209ENST00000601592 RINT1Q6NUQ1 792 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 ABI1Q8IZP0 508 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 MICALL1Q8N3F8 863 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 KRI1Q8N9T8 703 aaKnown RBP14.17□□□□□ -0.14
USE1-209ENST00000601592 FBXO22Q8NEZ5 403 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 BSNDQ8WZ55 320 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 CPB2Q96IY4 423 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 EPSTI1Q96J88 318 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 CHST12Q9NRB3 414 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 CCDC39Q9UFE4 941 aa14.17□□□□□ -0.14
USE1-209ENST00000601592 TDRD15B5MCY1 1934 aaKnown RBP14.16□□□□□ -0.14
USE1-209ENST00000601592 A0A0U1RQF3 1178 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 CCDC169A6NNP5 214 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 SPTLC2O15270 562 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 NCLP19338 710 aaKnown RBP14.16□□□□□ -0.14
USE1-209ENST00000601592 NAMPTP43490 491 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 ERVK-21P61565 698 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 USP49Q70CQ1 688 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 GPBP1Q86WP2 473 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
USE1-209ENST00000601592 CMTR2Q8IYT2 770 aaKnown RBP14.16□□□□□ -0.14
USE1-209ENST00000601592 SYT2Q8N9I0 419 aaPredicted RBP14.16□□□□□ -0.14
USE1-209ENST00000601592 LINC00301Q8NCQ3 95 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 ZNF689Q96CS4 500 aaPredicted RBP14.16□□□□□ -0.14
USE1-209ENST00000601592 DRC1Q96MC2 740 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 KIFC3Q9BVG8 833 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 CCSER1Q9C0I3 900 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 C2orf40Q9H1Z8 148 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 ELAC1Q9H777 363 aaKnown RBP14.16□□□□□ -0.14
USE1-209ENST00000601592 RC3H2Q9HBD1 1191 aaKnown RBP14.16□□□□□ -0.14
USE1-209ENST00000601592 FAM105AQ9NUU6 356 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 MRPL42Q9Y6G3 142 aaKnown RBP14.16□□□□□ -0.14
USE1-209ENST00000601592 PLXNA4Q9HCM2 1894 aa14.16□□□□□ -0.14
USE1-209ENST00000601592 PRRC2BQ5JSZ5 2229 aaKnown RBP14.15□□□□□ -0.14
USE1-209ENST00000601592 B4GALT5O43286 388 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 HOXA2O43364 376 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 GTPBP6O43824 516 aaPredicted RBP14.15□□□□□ -0.14
USE1-209ENST00000601592 TSPAN1O60635 241 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 YEATS4O95619 227 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 KRT18P05783 430 aaKnown RBP14.15□□□□□ -0.14
USE1-209ENST00000601592 SKIP12755 728 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 SLC12A3P55017 1021 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 PEX3P56589 373 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 FAM189BP81408 668 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 DNM1Q05193 864 aaKnown RBP14.15□□□□□ -0.14
USE1-209ENST00000601592 POU5F1BQ06416 359 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 DMP1Q13316 513 aaPredicted RBP14.15□□□□□ -0.14
USE1-209ENST00000601592 ADGRE1Q14246 886 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 MCM6Q14566 821 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 EPC2Q52LR7 807 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 NOTUMQ6P988 496 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 C1orf186Q6ZWK4 172 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 TMEM192Q8IY95 271 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 CRIPAKQ8N1N5 446 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 KCTD17Q8N5Z5 321 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 MAFAQ8NHW3 353 aaPredicted RBP14.15□□□□□ -0.14
USE1-209ENST00000601592 PPM1EQ8WY54 764 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 LPPQ93052 612 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 SAMD11Q96NU1 681 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 NFKBIZQ9BYH8 718 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 TRIM6Q9C030 488 aaPredicted RBP14.15□□□□□ -0.14
USE1-209ENST00000601592 ATG2AQ2TAZ0 1938 aa14.15□□□□□ -0.14
USE1-209ENST00000601592 NPHP3-ACAD11A0A0J9YXS1 232 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 SFI1A8K8P3 1242 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 CSPG5O95196 566 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 BRD1O95696 1058 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 EOMESO95936 686 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 PRKCBP05771 671 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 ATF7P17544 494 aaPredicted RBP14.14□□□□□ -0.15
USE1-209ENST00000601592 GUCY2CP25092 1073 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 AXLP30530 894 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 ME1P48163 572 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 RAB27AP51159 221 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
USE1-209ENST00000601592 PCBP1Q15365 356 aaKnown RBP eCLIP14.14□□□□□ -0.15
USE1-209ENST00000601592 MAPK6Q16659 721 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 RRAGBQ5VZM2 374 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 CDCA2Q69YH5 1023 aaPredicted RBP14.14□□□□□ -0.15
USE1-209ENST00000601592 CDR2LQ86X02 465 aaPredicted RBP14.14□□□□□ -0.15
USE1-209ENST00000601592 HELQQ8TDG4 1101 aa14.14□□□□□ -0.15
USE1-209ENST00000601592 LRRC15Q8TF66 581 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms