RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MFSD5Q6N075 450 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 FAM228AQ86W67 206 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 BADQ92934 168 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 CCDC34Q96HJ3 373 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 NTPCRQ9BSD7 190 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 ARHGAP28Q9P2N2 729 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 PCDHA5Q9Y5H7 936 aa22.09■■□□□ 1.13
SHKBP1-222ENST00000600320 MKI67P46013 3256 aaKnown RBP22.08■■□□□ 1.13
SHKBP1-222ENST00000600320 CSF2RAP15509 400 aa22.08■■□□□ 1.13
SHKBP1-222ENST00000600320 EIF4BP23588 611 aaKnown RBP22.08■■□□□ 1.13
SHKBP1-222ENST00000600320 MBTD1Q05BQ5 628 aa22.08■■□□□ 1.13
SHKBP1-222ENST00000600320 SRGAP1Q7Z6B7 1085 aa22.08■■□□□ 1.13
SHKBP1-222ENST00000600320 TMEM161BQ8NDZ6 487 aa22.08■■□□□ 1.13
SHKBP1-222ENST00000600320 GLIS3Q8NEA6 775 aa22.08■■□□□ 1.13
SHKBP1-222ENST00000600320 NFKBIZQ9BYH8 718 aa22.08■■□□□ 1.13
SHKBP1-222ENST00000600320 DNAH12Q6ZR08 3092 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 EDN1P05305 212 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 CD52P31358 61 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 TCTN1Q2MV58 587 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 TAS1R3Q7RTX0 852 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 DEFB128Q7Z7B8 93 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 FAM178BQ8IXR5 827 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 CCDC113Q9H0I3 377 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 NUP62CLQ9H1M0 184 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 ERVK-5Q9HDB9 667 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 SEL1LQ9UBV2 794 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 NR2E3Q9Y5X4 410 aa22.07■■□□□ 1.12
SHKBP1-222ENST00000600320 TET1Q8NFU7 2136 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 INO80B-WBP1J3KQ70 363 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 K7ENM7 598 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 RPS6KA5O75582 802 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 CXCL10P02778 98 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 SARSP49591 514 aaKnown RBP22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 CASP5P51878 434 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 AMHR2Q16671 573 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 FAM26FQ5R3K3 315 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 TSHZ1Q6ZSZ6 1077 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 HAUS6Q7Z4H7 955 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 ZBTB8OSQ8IWT0 167 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 TMEM199Q8N511 208 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 SPATA20Q8TB22 786 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 INO80BQ9C086 356 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 C2orf40Q9H1Z8 148 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 OLFML3Q9NRN5 406 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 EXOC1Q9NV70 894 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 HOOK1Q9UJC3 728 aaKnown RBP22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 USP20Q9Y2K6 914 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 SQORQ9Y6N5 450 aa22.06■■□□□ 1.12
SHKBP1-222ENST00000600320 DENND3A2RUS2 1198 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 PPP1R37O75864 691 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 PARNO95453 639 aaKnown RBP22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 MYBP10242 640 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 MAPTP10636 758 aaKnown RBP22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 RFC2P35250 354 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 SMTNP53814 917 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 KCNB1Q14721 858 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 ZC2HC1CQ53FD0 456 aaPredicted RBP22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 ZNF720Q7Z2F6 126 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 SMARCE1Q969G3 411 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 FZD8Q9H461 694 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 TMEM134Q9H6X4 195 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 MRPL44Q9H9J2 332 aaKnown RBP22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 ST3GAL5Q9UNP4 418 aa22.05■■□□□ 1.12
SHKBP1-222ENST00000600320 TTLL13PA6NNM8 815 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 B4GALT5O43286 388 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 RHOBTB3O94955 611 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 ACRP10323 421 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 PTMSP20962 102 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 EPHB4P54760 987 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 NFX1Q12986 1120 aaKnown RBP22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 PLEKHG4Q58EX7 1191 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 PPP4R3CPQ6ZMV5 832 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 USP38Q8NB14 1042 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 KIAA0895Q8NCT3 520 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 DBF4BQ8NFT6 615 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 KCNN1Q92952 543 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 STRA6Q9BX79 667 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 TMX1Q9H3N1 280 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 ST6GALNAC4Q9H4F1 302 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 SLC39A2Q9NP94 309 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 TMEM63CQ9P1W3 806 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 KCNG1Q9UIX4 513 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 MAN1B1Q9UKM7 699 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 PADI3Q9ULW8 664 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 PHLPP2Q6ZVD8 1323 aa22.04■■□□□ 1.12
SHKBP1-222ENST00000600320 TSPAN1O60635 241 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 SMC2O95347 1197 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 GCNT3O95395 438 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 PRKCBP05771 671 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 EFNA5P52803 228 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 GTF2BQ00403 316 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 FPGSQ05932 587 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 STK4Q13043 487 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 PAK2Q13177 524 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 MAPK6Q16659 721 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 NT5DC1Q5TFE4 455 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 CATSPER4Q7RTX7 472 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 IFIH1Q9BYX4 1025 aaKnown RBP22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 IL23AQ9NPF7 189 aa22.03■■□□□ 1.12
SHKBP1-222ENST00000600320 GDAQ9Y2T3 454 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms