RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
LIG1-214ENST00000597146 HEATR3Q7Z4Q2 680 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 ZNF280BQ86YH2 543 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 IGDCC4Q8TDY8 1250 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 SMG7Q92540 1137 aaKnown RBP17.53■□□□□ 0.4
LIG1-214ENST00000597146 ZNF707Q96C28 371 aaPredicted RBP17.53■□□□□ 0.4
LIG1-214ENST00000597146 LY9Q9HBG7 655 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 SLC2A4RGQ9NR83 387 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 FBXO4Q9UKT5 387 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 MTF2Q9Y483 593 aaPredicted RBP17.53■□□□□ 0.4
LIG1-214ENST00000597146 NUMBLQ9Y6R0 609 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 CNOT1A5YKK6 2376 aaKnown RBP17.52■□□□□ 0.4
LIG1-214ENST00000597146 ZFYVE26Q68DK2 2539 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 ANKRD11Q6UB99 2663 aaPredicted RBP17.52■□□□□ 0.4
LIG1-214ENST00000597146 E7EWF7 191 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 MEIS1O00470 390 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 GSPT1P15170 499 aaKnown RBP17.52■□□□□ 0.4
LIG1-214ENST00000597146 CHMLP26374 656 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 STARD6P59095 220 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 NOMO2Q5JPE7 1267 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 PPM1JQ5JR12 505 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 RAB11FIP4Q86YS3 637 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 CCDC82Q8N4S0 544 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 NCOA7Q8NI08 942 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 ATRIPQ8WXE1 791 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 NXPE3Q969Y0 559 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 CCDC136Q96JN2 1154 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 MAP3K14Q99558 947 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 ANO3Q9BYT9 981 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 EPC1Q9H2F5 836 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 DACT1Q9NYF0 836 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 PCDHGA2Q9Y5H1 932 aa17.52■□□□□ 0.4
LIG1-214ENST00000597146 MAFBQ9Y5Q3 323 aaPredicted RBP17.52■□□□□ 0.4
LIG1-214ENST00000597146 ANHXE9PGG2 379 aa17.51■□□□□ 0.39
LIG1-214ENST00000597146 DHX15O43143 795 aaKnown RBP17.51■□□□□ 0.39
LIG1-214ENST00000597146 LAMP2P13473 410 aa17.51■□□□□ 0.39
LIG1-214ENST00000597146 SNW1Q13573 536 aaKnown RBP17.51■□□□□ 0.39
LIG1-214ENST00000597146 RALGAPA1Q6GYQ0 2036 aa17.51■□□□□ 0.39
LIG1-214ENST00000597146 TSSK4Q6SA08 328 aa17.51■□□□□ 0.39
LIG1-214ENST00000597146 GLB1LQ6UWU2 654 aa17.51■□□□□ 0.39
LIG1-214ENST00000597146 NLRP7Q8WX94 980 aa17.51■□□□□ 0.39
LIG1-214ENST00000597146 SECISBP2LQ93073 1101 aaKnown RBP17.51■□□□□ 0.39
LIG1-214ENST00000597146 LZTS2Q9BRK4 669 aa17.51■□□□□ 0.39
LIG1-214ENST00000597146 RPP25Q9BUL9 199 aaKnown RBP17.51■□□□□ 0.39
LIG1-214ENST00000597146 BCO2Q9BYV7 579 aa17.51■□□□□ 0.39
LIG1-214ENST00000597146 MRPL17Q9NRX2 175 aaKnown RBP17.51■□□□□ 0.39
LIG1-214ENST00000597146 TEX28O15482 410 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 OFD1O75665 1012 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 SPATA31D3P0C874 917 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 AK2P54819 239 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 GPC5P78333 572 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 UBXN2BQ14CS0 331 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 TWF2Q6IBS0 349 aaKnown RBP17.5■□□□□ 0.39
LIG1-214ENST00000597146 TYW1BQ6NUM6 668 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 SPATA31D4Q6ZUB0 917 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 MB21D2Q8IYB1 491 aaPredicted RBP17.5■□□□□ 0.39
LIG1-214ENST00000597146 ZBTB44Q8NCP5 570 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 CEP131Q9UPN4 1083 aa17.5■□□□□ 0.39
LIG1-214ENST00000597146 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
LIG1-214ENST00000597146 TDRD15B5MCY1 1934 aaKnown RBP17.49■□□□□ 0.39
LIG1-214ENST00000597146 KANSL1LA0AUZ9 987 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 FAM86B1E9PN63 330 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 MAGEB2O15479 319 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 LILRB5O75023 590 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 DDHD2O94830 711 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 GLUD1P00367 558 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 URODP06132 367 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 FAM86B2P0C5J1 330 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 TMOD1P28289 359 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 PTH1RQ03431 593 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 COL9A3Q14050 684 aaPredicted RBP17.49■□□□□ 0.39
LIG1-214ENST00000597146 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 PLA2G4DQ86XP0 818 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 RHOBTB2Q9BYZ6 727 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 PIDD1Q9HB75 910 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 ZSCAN32Q9NX65 697 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 GABBR1Q9UBS5 961 aa17.49■□□□□ 0.39
LIG1-214ENST00000597146 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.49■□□□□ 0.39
LIG1-214ENST00000597146 ADH1AP07327 375 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 ZNF76P36508 570 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 SREBF1P36956 1147 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 GNAQP50148 359 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 AFF1P51825 1210 aaKnown RBP17.48■□□□□ 0.39
LIG1-214ENST00000597146 DRP2Q13474 957 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 CYP26C1Q6V0L0 522 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 TAS1R1Q7RTX1 841 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 FGF14Q92915 247 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 SHDQ96IW2 340 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 RPS6KC1Q96S38 1066 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 DDX23Q9BUQ8 820 aaKnown RBP17.48■□□□□ 0.39
LIG1-214ENST00000597146 FAM105AQ9NUU6 356 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 PIN4Q9Y237 131 aaKnown RBP17.48■□□□□ 0.39
LIG1-214ENST00000597146 ZZEF1O43149 2961 aa17.48■□□□□ 0.39
LIG1-214ENST00000597146 FASNP49327 2511 aaKnown RBP17.48■□□□□ 0.39
LIG1-214ENST00000597146 ASPMQ8IZT6 3477 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 IPO5O00410 1097 aaKnown RBP17.47■□□□□ 0.39
LIG1-214ENST00000597146 SOD2P04179 222 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 CD72P21854 359 aa17.47■□□□□ 0.39
LIG1-214ENST00000597146 KCNA4P22459 653 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms