RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 SLFN5Q08AF3 891 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 UBAP2LQ14157 1087 aaKnown RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 ZNF423Q2M1K9 1284 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 XP32Q5T750 250 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 ZNF574Q6ZN55 896 aaPredicted RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 CACNA2D4Q7Z3S7 1137 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 RTN4RL1Q86UN2 441 aaPredicted RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 VWA5B2Q8N398 1253 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 SPATA5Q8NB90 893 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 TMEM87AQ8NBN3 555 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 SLC22A17Q8WUG5 538 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 STAMQ92783 540 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 DDRGK1Q96HY6 314 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 TRERF1Q96PN7 1200 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 INSM2Q96T92 566 aaPredicted RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 ZNF768Q9H5H4 540 aaKnown RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 ENAMQ9NRM1 1142 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 TYW1Q9NV66 732 aaKnown RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 DKK4Q9UBT3 224 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 DDX41Q9UJV9 622 aaKnown RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 NDRG2Q9UN36 371 aaKnown RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 ASCC3Q8N3C0 2202 aaKnown RBP5.9□□□□□ -1.47
ERCC1-216ENST00000592444 LCTP09848 1927 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 SPAG17Q6Q759 2223 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 C17orf102A2RUQ5 167 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 K7ESF4 209 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 ERVH48-1M5A8F1 160 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 C2CD2LO14523 706 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 MSTNO14793 375 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 CHRNA1P02708 482 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 ALAS1P13196 640 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 CR2P20023 1033 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 ELAVL4P26378 380 aaKnown RBP5.89□□□□□ -1.47
ERCC1-216ENST00000592444 ADSSP30520 456 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 PBX3P40426 434 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 GNAI1P63096 354 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 KRT17Q04695 432 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 ARHGAP1Q07960 439 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 LPIN1Q14693 890 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 WTAPQ15007 396 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 WDR43Q15061 677 aaKnown RBP eCLIP5.89□□□□□ -1.47
ERCC1-216ENST00000592444 LY6KQ17RY6 165 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 MUM1L1Q5H9M0 696 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 FAM26DQ5JW98 314 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 PARM1Q6UWI2 310 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 NSMFQ6X4W1 530 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 C15orf39Q6ZRI6 1047 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 GPR155Q7Z3F1 870 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 PNMA1Q8ND90 353 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 FGF14Q92915 247 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 FAM117AQ9C073 453 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 KDM4CQ9H3R0 1056 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 CWH43Q9H720 699 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 EHMT1Q9H9B1 1298 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 WDR6Q9NNW5 1121 aaKnown RBP5.89□□□□□ -1.47
ERCC1-216ENST00000592444 POLMQ9NP87 494 aaPredicted RBP5.89□□□□□ -1.47
ERCC1-216ENST00000592444 IFT57Q9NWB7 429 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 LRFN2Q9ULH4 789 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 MRPS17Q9Y2R5 130 aaKnown RBP5.89□□□□□ -1.47
ERCC1-216ENST00000592444 CLUHO75153 1309 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 MYH15Q9Y2K3 1946 aa5.89□□□□□ -1.47
ERCC1-216ENST00000592444 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.88□□□□□ -1.47
ERCC1-216ENST00000592444 CAVIN2O95810 425 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 GH1P01241 217 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 CYP2E1P05181 493 aaPredicted RBP5.88□□□□□ -1.47
ERCC1-216ENST00000592444 MYF5P13349 255 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 LAG3P18627 525 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 RFX5P48382 616 aaPredicted RBP5.88□□□□□ -1.47
ERCC1-216ENST00000592444 ATP8B2P98198 1209 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 PFKPQ01813 784 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 GAS6Q14393 721 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 KRT25Q7Z3Z0 450 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 PIP4P1Q86T03 277 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 WDR5BQ86VZ2 330 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 MIGA1Q8NAN2 632 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 RNF217Q8TC41 542 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 EPS8L1Q8TE68 723 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 AUTS2Q8WXX7 1259 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 YTHDC1Q96MU7 727 aaKnown RBP5.88□□□□□ -1.47
ERCC1-216ENST00000592444 IER2Q9BTL4 223 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 ZNF395Q9H8N7 513 aaPredicted RBP5.88□□□□□ -1.47
ERCC1-216ENST00000592444 LMAN1LQ9HAT1 526 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 TMPRSS4Q9NRS4 437 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 HEBP1Q9NRV9 189 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 TCP11L1Q9NUJ3 509 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 ADD3Q9UEY8 706 aaKnown RBP5.88□□□□□ -1.47
ERCC1-216ENST00000592444 FANCIQ9NVI1 1328 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 AHCTF1Q8WYP5 2266 aa5.88□□□□□ -1.47
ERCC1-216ENST00000592444 ADAM23O75077 832 aa5.87□□□□□ -1.47
ERCC1-216ENST00000592444 RPP40O75818 363 aaKnown RBP5.87□□□□□ -1.47
ERCC1-216ENST00000592444 ALDH1L1O75891 902 aa5.87□□□□□ -1.47
ERCC1-216ENST00000592444 CFBP00751 764 aa5.87□□□□□ -1.47
ERCC1-216ENST00000592444 ADH1AP07327 375 aa5.87□□□□□ -1.47
ERCC1-216ENST00000592444 CCDC192P0DO97 292 aa5.87□□□□□ -1.47
ERCC1-216ENST00000592444 SCG2P13521 617 aa5.87□□□□□ -1.47
ERCC1-216ENST00000592444 CD52P31358 61 aa5.87□□□□□ -1.47
ERCC1-216ENST00000592444 ADD1P35611 737 aaKnown RBP5.87□□□□□ -1.47
ERCC1-216ENST00000592444 IL12RB1P42701 662 aa5.87□□□□□ -1.47
ERCC1-216ENST00000592444 ALDH7A1P49419 539 aaKnown RBP5.87□□□□□ -1.47
ERCC1-216ENST00000592444 CREB5Q02930 508 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms