RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	ZEB2	O60315	1214 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	IRAK1	P51617	712 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	CYP4A11	Q02928	519 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	BIRC3	Q13489	604 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	TCEAL1	Q15170	157 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	KDM7A	Q6ZMT4	941 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	C12orf56	Q8IXR9	622 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	PPM1E	Q8WY54	764 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	RFFL	Q8WZ73	363 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	DYDC2	Q96IM9	177 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	MS4A14	Q96JA4	679 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	SIX2	Q9NPC8	291 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	PAPPA2	Q9BXP8	1791 aa		15.23	■□□□□ 0.03
NEDD4L-223	ENST00000588516	MIF4GD	A9UHW6	222 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	KRIT1	O00522	736 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	PMM2	O15305	246 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	EIF3H	O15372	352 aa	Known RBP eCLIP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	TGFB1I1	O43294	461 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	CFB	P00751	764 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	GLI1	P08151	1106 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	ACTN1	P12814	892 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	ERCC3	P19447	782 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	ABCD1	P33897	745 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	MAGEA9	P43362	315 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	HADHB	P55084	474 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	ENOX2	Q16206	610 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	ODR4	Q5SWX8	454 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	DAAM2	Q86T65	1068 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	USP37	Q86T82	979 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	EFCAB13	Q8IY85	973 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	GSPT2	Q8IYD1	628 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	OGFOD1	Q8N543	542 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	U2AF1L4	Q8WU68	220 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	FAM81B	Q96LP2	452 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	CCDC43	Q96MW1	224 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	ZIM3	Q96PE6	472 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	ACCS	Q96QU6	501 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	TMEM106C	Q9BVX2	250 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	TDRD3	Q9H7E2	651 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	VCPKMT	Q9H867	229 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	APEX2	Q9UBZ4	518 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	RSPH14	Q9UHP6	348 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	TCEAL9	Q9UHQ7	104 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	DBR1	Q9UK59	544 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	DNAJC12	Q9UKB3	198 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	NFU1	Q9UMS0	254 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	SCAF8	Q9UPN6	1271 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	UTP11	Q9Y3A2	253 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	ATXN2	Q99700	1313 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	TRIOBP	Q9H2D6	2365 aa		15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	MKI67	P46013	3256 aa	Known RBP	15.22	■□□□□ 0.03
NEDD4L-223	ENST00000588516	ANKRD62	A6NC57	917 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	FAM187A	A6NFU0	413 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516		F8VZ95	297 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	EML1	O00423	815 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	GGPS1	O95749	300 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	P4HB	P07237	508 aa	Known RBP	15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	HOXA13	P31271	388 aa	Predicted RBP	15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	CACNB3	P54284	484 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	EIF3B	P55884	814 aa	Known RBP	15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	MYL7	Q01449	175 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	CTTN	Q14247	550 aa	Known RBP	15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	HLTF	Q14527	1009 aa	Known RBP eCLIP	15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	PRAMEF18	Q5VWM3	479 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	C3orf20	Q8ND61	904 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	SLC30A5	Q8TAD4	765 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	HVCN1	Q96D96	273 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	HES6	Q96HZ4	224 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	GDAP1L1	Q96MZ0	367 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	MXRA8	Q9BRK3	442 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	FAM129A	Q9BZQ8	928 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	INTS2	Q9H0H0	1204 aa	Known RBP	15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	CARD9	Q9H257	536 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	AGPAT3	Q9NRZ7	376 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	15.21	■□□□□ 0.03	4e-8	■■■□□ 17
NEDD4L-223	ENST00000588516	KCNG1	Q9UIX4	513 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	RASAL2	Q9UJF2	1139 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	EXOC7	Q9UPT5	735 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516	STXBP5L	Q9Y2K9	1186 aa		15.21	■□□□□ 0.03
NEDD4L-223	ENST00000588516		A0A087WUV0	522 aa	Predicted RBP	15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	FAM196B	A6NMK8	535 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	OPLAH	O14841	1288 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	CLIC2	O15247	247 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	RAD51C	O43502	376 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	EVI5	O60447	810 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	EXOC3	O60645	756 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	LYPLA2	O95372	231 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	MYZAP	P0CAP1	466 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	FDX1	P10109	184 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	CARS	P49589	748 aa	Known RBP	15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	CORO7	P57737	925 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	GNGT1	P63211	74 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	ENPEP	Q07075	957 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	KIF22	Q14807	665 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	DRAP1	Q14919	205 aa	Predicted RBP	15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	DLGAP5	Q15398	846 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	KLHL7	Q8IXQ5	586 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	UBL4B	Q8N7F7	174 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	CASKIN2	Q8WXE0	1202 aa		15.2	■□□□□ 0.02
NEDD4L-223	ENST00000588516	ATP6V1G3	Q96LB4	118 aa		15.2	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms