RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 PDCD11Q14690 1871 aaKnown RBP12.85□□□□□ -0.35
LRFN3-202ENST00000585876 HIP1RO75146 1068 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 ME1P48163 572 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 ZNF131P52739 623 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 FAM187BQ17R55 369 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 NPAS4Q8IUM7 802 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 MYOCDQ8IZQ8 938 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 RASSF8Q8NHQ8 419 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 SPATA32Q96LK8 384 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 PRIMPOLQ96LW4 560 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 PLIN2Q99541 437 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 RAD9AQ99638 391 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 ADAM2Q99965 735 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 CCDC113Q9H0I3 377 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 C2orf40Q9H1Z8 148 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 CUEDC2Q9H467 287 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 ELAC1Q9H777 363 aaKnown RBP12.85□□□□□ -0.35
LRFN3-202ENST00000585876 DACT1Q9NYF0 836 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 YBX2Q9Y2T7 364 aaKnown RBP12.85□□□□□ -0.35
LRFN3-202ENST00000585876 PRUNE2Q8WUY3 3088 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 TDRD15B5MCY1 1934 aaKnown RBP12.85□□□□□ -0.35
LRFN3-202ENST00000585876 PHLPP2Q6ZVD8 1323 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 ADGRA3Q8IWK6 1321 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 CNTNAP2Q9UHC6 1331 aa12.85□□□□□ -0.35
LRFN3-202ENST00000585876 CITO14578 2027 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 TRIP11Q15643 1979 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 A0A0U1RQF3 1178 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 FAM237AA0A1B0GTK4 181 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 DENND3A2RUS2 1198 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 TSPAN1O60635 241 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 CSDE1O75534 798 aaKnown RBP12.84□□□□□ -0.35
LRFN3-202ENST00000585876 SCP2P22307 547 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 AXLP30530 894 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 HOXA11P31270 313 aaPredicted RBP12.84□□□□□ -0.35
LRFN3-202ENST00000585876 PBX2P40425 430 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 EFNA5P52803 228 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 MCM6Q14566 821 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 ADALQ6DHV7 355 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 CATSPER4Q7RTX7 472 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 GPBP1Q86WP2 473 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 SPIRE2Q8WWL2 714 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 RSPH1Q8WYR4 309 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 TIFAQ96CG3 184 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 CCDC51Q96ER9 411 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 IFT74Q96LB3 600 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 REEP2Q9BRK0 252 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 NTPCRQ9BSD7 190 aaKnown RBP12.84□□□□□ -0.35
LRFN3-202ENST00000585876 FZD8Q9H461 694 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 PRMT7Q9NVM4 692 aaPredicted RBP12.84□□□□□ -0.35
LRFN3-202ENST00000585876 ARHGAP28Q9P2N2 729 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 KCNG1Q9UIX4 513 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 MSRAQ9UJ68 235 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 INSL6Q9Y581 213 aa12.84□□□□□ -0.35
LRFN3-202ENST00000585876 LRRIQ4A6NIV6 560 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 TLL1O43897 1013 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
LRFN3-202ENST00000585876 PLS3P13797 630 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 ZSCAN20P17040 1043 aaPredicted RBP12.83□□□□□ -0.36
LRFN3-202ENST00000585876 NCLP19338 710 aaKnown RBP12.83□□□□□ -0.36
LRFN3-202ENST00000585876 FGFR4P22455 802 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 CMA1P23946 247 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 STAT6P42226 847 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 NPTX2P47972 431 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 RAB27AP51159 221 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 RABGGTBP53611 331 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 DMP1Q13316 513 aaPredicted RBP12.83□□□□□ -0.36
LRFN3-202ENST00000585876 CNNM4Q6P4Q7 775 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 MAEAQ7L5Y9 396 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 TMCO2Q7Z6W1 182 aaPredicted RBP12.83□□□□□ -0.36
LRFN3-202ENST00000585876 ZNF598Q86UK7 904 aaKnown RBP12.83□□□□□ -0.36
LRFN3-202ENST00000585876 ZBTB8OSQ8IWT0 167 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 ZNF689Q96CS4 500 aaPredicted RBP12.83□□□□□ -0.36
LRFN3-202ENST00000585876 CHAMP1Q96JM3 812 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 PYM1Q9BRP8 204 aaKnown RBP12.83□□□□□ -0.36
LRFN3-202ENST00000585876 MAGEF1Q9HAY2 307 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 KBTBD4Q9NVX7 518 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 TMEM161AQ9NX61 479 aa12.83□□□□□ -0.36
LRFN3-202ENST00000585876 PIN4Q9Y237 131 aaKnown RBP12.83□□□□□ -0.36
LRFN3-202ENST00000585876 ZMYM2Q9UBW7 1377 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 A0A1W2PQ27 194 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 A0A1W2PQ64 194 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 A0A1W2PQD8 194 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 INO80B-WBP1J3KQ70 363 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 ZNF623O75123 536 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 DGKIO75912 1065 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 ERLIN2O94905 339 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 CA3P07451 260 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 STAG3L1P0CL83 205 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 SKIP12755 728 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 ATF7P17544 494 aaPredicted RBP12.82□□□□□ -0.36
LRFN3-202ENST00000585876 GIT2Q14161 759 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 NOTUMQ6P988 496 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 ECHDC2Q86YB7 292 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 IQUBQ8NA54 791 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 DEPTORQ8TB45 409 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
LRFN3-202ENST00000585876 TTYH1Q9H313 450 aaPredicted RBP12.82□□□□□ -0.36
LRFN3-202ENST00000585876 TMEM134Q9H6X4 195 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms